DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5346 and AT1G52820

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_175691.1 Gene:AT1G52820 / 841715 AraportID:AT1G52820 Length:317 Species:Arabidopsis thaliana


Alignment Length:378 Identity:78/378 - (20%)
Similarity:130/378 - (34%) Gaps:122/378 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VPIIDLAHCGIEEVPVKSVVNRVGHQLKKALSEKGMALLVNHGISDEKLKTAWDHLDDFVNLPPD 84
            :|:||.::..::  |.:...:.....::|||.:.|........|..|..|:.:..|::..:||  
plant    12 LPVIDFSNKNLK--PGEPEWDLTRADVQKALQDYGYFEASFDRIPFELRKSVFGALEELFDLP-- 72

  Fly    85 IRQHYIRADGDK--HGYVSRGQ-----------------QQRFDGKSPELRHAFNISTLNAQNLP 130
             .|..:|....|  ||||  ||                 .::.|..:.:|....|||.       
plant    73 -LQTKLRNVSKKPFHGYV--GQYPMVPLYESMGIDDSDIAEKVDAFTEKLWPQGNISF------- 127

  Fly   131 EEPLPGFADHISTLATDFKALASFILQALAVSLDIPHTFFLEKH--SHMLSGDHDNMSSLRMLYY 193
            ...:..|:..:|.|....:.:             |..:|.|:|:  .|:    |.....||::.|
plant   128 STTIQSFSKKLSELDITIRRM-------------IMESFGLDKYIDEHL----HSTNYLLRVMKY 175

  Fly   194 PPIVDDEPGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEHKLGNGAVI 258
                                                           .||:.:  |.|:|..|  
plant   176 -----------------------------------------------KGPDTE--ETKVGLNA-- 189

  Fly   259 QCPPHVDYGTFTLLSQDSEGGLEVRLPGSEKWNRVGHLPGSILVNCGEILNIWTQGRYPALQHRV 323
                |.|....|:|.|:...||||:.. .:.|.:|.....|..|..|:.|.....||..:..|||
plant   190 ----HTDKNIVTILYQNHVEGLEVQTK-DKNWIKVKPTQDSFTVMIGDSLYALLNGRLHSPYHRV 249

  Fly   324 IIPEQETIRARGRHSIAFFCHPDNITTISPTDLPNPDAVQDKACLKQRKKSFK 376
            ::...||     |:|:..|..|.....:|     :||.:.|    ::..:.||
plant   250 MMTGTET-----RYSLGLFSIPKAGHIVS-----SPDELVD----EEHPRLFK 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 76/366 (21%)
AT1G52820NP_175691.1 PLN02254 2..301 CDD:215142 78/378 (21%)

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