DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5346 and AT1G52810

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_175690.1 Gene:AT1G52810 / 841714 AraportID:AT1G52810 Length:289 Species:Arabidopsis thaliana


Alignment Length:155 Identity:34/155 - (21%)
Similarity:61/155 - (39%) Gaps:32/155 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LDTLLSRSVVPIIDLAHCGIEEVPVKSVVNRVGHQLKKALSEKGMALLVNHGISDEKLKTAWDHL 75
            |:|.|:.. :|:||.....::  |.....:.|...:::||.|.|....:...:..|..|..:|..
plant     4 LETTLALQ-LPVIDFTSRDLK--PGTIQWDSVRADVRRALEEYGCFEALFDKVPLELRKAVFDAS 65

  Fly    76 DDFVNLPPDIRQHYIRADGDKHGYVSRGQQQRFDGKSPEL--------RHAFNISTLNA------ 126
            ::...||.:.::.          .||:.:.:.:.|:.|.|        ..|.|...:||      
plant    66 EEVFQLPLETKKR----------VVSKRKYRGYVGQIPTLPLFEVMGVDFAENPDKVNAFTHKLW 120

  Fly   127 ---QNLPEEPLPGFADHISTLATDF 148
               .|...|.:..||:.:|.|  ||
plant   121 PQGNNNFSEAVMSFAEKVSEL--DF 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 31/146 (21%)
AT1G52810NP_175690.1 PLN02365 12..267 CDD:177993 31/146 (21%)

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