DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5346 and AT1G52800

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_175689.1 Gene:AT1G52800 / 841713 AraportID:AT1G52800 Length:314 Species:Arabidopsis thaliana


Alignment Length:365 Identity:82/365 - (22%)
Similarity:136/365 - (37%) Gaps:100/365 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TLLSRSVVPIIDLAHCGIEEV-PVKSVVNRVGHQLKKALSEKGMALLVNHGISDEKLKTAWDHLD 76
            ::|..:.|||:||.  ..:|: |..|....|..:..:||.|.|..|.|..|::.:...:.:...:
plant     3 SILKTTKVPILDLT--SQQELKPNTSTWRSVSREACEALEEYGCFLAVYDGVTQQLDDSIFAAAE 65

  Fly    77 DFVNLPPDIRQHYIRADGDKHGYVSRGQQQRFDGKSP--ELRHAFNISTLN----AQNLPEEPLP 135
            :..:||.:.::..:. :...||||         |:.|  .|.....:..:.    ||.......|
plant    66 ELFDLPTETKKKNVN-EKPYHGYV---------GQMPVIPLHEGLGVDYVTNKEIAQRFTHLMWP 120

  Fly   136 GFADHI-STLATDFKALASFILQALAVSLDIPHTFFLEKH--SHMLSGDHDNMSSLRMLYY--PP 195
            ...|.. :|:.|...|:|.  |..|.|.: |...:.:|||  ||:.|..:    .|:.|.|  ||
plant   121 QGNDRFCNTVHTFSNAVAE--LDRLVVRM-IFENYGVEKHYESHVGSKTY----LLKFLKYLAPP 178

  Fly   196 IVDDEPGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEHKLGNGAVIQC 260
                     :.|             :.|.|                                   
plant   179 ---------ESI-------------SMPAF----------------------------------- 186

  Fly   261 PPHVDYGTFTLLSQDSEGGLEVRLPGSEKWNRVGHLPGSILVNCGEILNIWTQGRYPALQHRVII 325
            |.|.|....::|.|:...||||:....| |..:...|.|.:|..|:|...|:..|..:.:|||.:
plant   187 PQHTDKTFLSILHQNDVNGLEVKSKDGE-WISLQLPPKSYVVMAGDISMGWSNDRIRSCEHRVTM 250

  Fly   326 PEQETIRARGRHSIAFFCHPDNITTISPTDLPNPDAVQDK 365
            ...:|     |:::..|....::.:| |.:|     |.||
plant   251 EGDKT-----RYTLGLFSFLTDLVSI-PEEL-----VDDK 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 81/358 (23%)
AT1G52800NP_175689.1 PLN02365 33..287 CDD:177993 72/333 (22%)

Return to query results.
Submit another query.