DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5346 and 2A6

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_171840.2 Gene:2A6 / 838763 AraportID:AT1G03410 Length:398 Species:Arabidopsis thaliana


Alignment Length:413 Identity:86/413 - (20%)
Similarity:144/413 - (34%) Gaps:121/413 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DTLLS---------RSVVPIIDLAHCGIEEVPVKSVVNRVGHQLKKALSEKGMALLVNHGISDEK 67
            |||.|         :..:|.:||....::.:..:|||.::|    .|....|...:||||||.|.
plant    77 DTLTSLKQTAPPSQQLTIPTVDLKGGSMDLISRRSVVEKIG----DAAERWGFFQVVNHGISVEV 137

  Fly    68 LKTAWDHLDDFVNLPPDIRQHYIRADGDKHGYVSRGQQQRFDGKSPELRHAFNISTLNAQNLPEE 132
            ::...:.:..|....|::::.:...|..:..............|:...|     .||.....|:.
plant   138 MERMKEGIRRFHEQDPEVKKRFYSRDHTRDVLYYSNIDLHTCNKAANWR-----DTLACYMAPDP 197

  Fly   133 P----LPGFADHI-STLATDFKALASFILQALAVSLDIPHTFFLE---KHSHMLSGDHDNMSSLR 189
            |    ||.....| ...:.....|..|:.:.|:.:|.:......:   ..||::.|.        
plant   198 PKLQDLPAVCGEIMMEYSKQLMTLGEFLFELLSEALGLNPNHLKDMGCAKSHIMFGQ-------- 254

  Fly   190 MLYYPPIVDDEPGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEHKLGN 254
              ||||               |.         |||.                             
plant   255 --YYPP---------------CP---------QPDL----------------------------- 264

  Fly   255 GAVIQCPPHVDYGTFTLLSQDSEGGLEVRLPGSEKWNRVGHLPGSILVNCGEILNIWTQGRYPAL 319
              .:....|.|:...|:|.||:.|||:|  ...:.|..|..:||::::|.|::|.:.:..::.:.
plant   265 --TLGISKHTDFSFITILLQDNIGGLQV--IHDQCWVDVSPVPGALVINIGDLLQLISNDKFISA 325

  Fly   320 QHRVIIPEQETIRARG----RHSIAFFCHPDNITTISPTDLPNPDAVQDKACLKQRKKSFKAAKE 380
            :||||        |.|    |.|:..|        :|....|||   :....:|:.......||.
plant   326 EHRVI--------ANGSSEPRISMPCF--------VSTFMKPNP---RIYGPIKELLSEQNPAKY 371

  Fly   381 RVYNAYQLIQKKFRDTYSSNNHS 403
            |     .|...:|.:|:.|...|
plant   372 R-----DLTITEFSNTFRSQTIS 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 73/357 (20%)
2A6NP_171840.2 PLN02393 57..386 CDD:215220 84/408 (21%)

Return to query results.
Submit another query.