DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5346 and SRG1

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_173145.1 Gene:SRG1 / 838272 AraportID:AT1G17020 Length:358 Species:Arabidopsis thaliana


Alignment Length:398 Identity:105/398 - (26%)
Similarity:161/398 - (40%) Gaps:123/398 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DDKLDTLLSRSVVPIIDLAH-CGIEEVPVKSVVNRVGHQLKKALSEKGMALLVNHGISDEKLKTA 71
            ||..|..:.   :||||:.. |.      .:.::....:|..|..|.|...||||||....|...
plant    44 DDDFDVKIE---IPIIDMKRLCS------STTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKV 99

  Fly    72 WDHLDDFVNLPPDIRQHYIRADGDKHGY-----VSRGQQQRFDG--------KSPELR--HAFNI 121
            ...:.||.|||.:.::.:.:...:..|:     ||  :.|:.|.        :..|||  |.|  
plant   100 KSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVS--EDQKLDWADLFFHTVQPVELRKPHLF-- 160

  Fly   122 STLNAQNLPEEPLPGFADHISTLATDFKALASFILQALAVSLDI-PHTFFLEKHSHMLSGDHDNM 185
                    |:.||| |.|.:...:::.:::|..::..:|.:|:| |..  |||    |..|.|::
plant   161 --------PKLPLP-FRDTLEMYSSEVQSVAKILIAKMARALEIKPEE--LEK----LFDDVDSV 210

  Fly   186 SSLRMLYYPPIVDDEPGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEH 250
            .|:||.||||               |.         |||                          
plant   211 QSMRMNYYPP---------------CP---------QPD-------------------------- 225

  Fly   251 KLGNGAVIQCPPHVDYGTFTLLSQ--DSEGGLEVRLPGSEKWNRVGHLPGSILVNCGEILNIWTQ 313
                 .||...||.|....|:|.|  |.| ||:::..|  ||..|..||.:.:||.|::|.|.|.
plant   226 -----QVIGLTPHSDSVGLTVLMQVNDVE-GLQIKKDG--KWVPVKPLPNAFIVNIGDVLEIITN 282

  Fly   314 GRYPALQHR-VIIPEQETIRARGRHSIAFFCHPDNITTISPTDLPNPDAVQDKACLKQRKKS-FK 376
            |.|.:::|| |:..|:|      |.|||.|.:......:.|.          |:.::::|.: ||
plant   283 GTYRSIEHRGVVNSEKE------RLSIATFHNVGMYKEVGPA----------KSLVERQKVARFK 331

  Fly   377 AAKERVYN 384
            ....:.||
plant   332 RLTMKEYN 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 96/365 (26%)
SRG1NP_173145.1 PLN02216 1..358 CDD:215129 105/398 (26%)

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