DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5346 and AT1G15540

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001322929.1 Gene:AT1G15540 / 838124 AraportID:AT1G15540 Length:327 Species:Arabidopsis thaliana


Alignment Length:321 Identity:57/321 - (17%)
Similarity:106/321 - (33%) Gaps:109/321 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 GISDEKLKTAWDHLDDFVNLPPDIRQHYIRADGDK--HGYVSRGQQQRFDGKSPELRHAFNISTL 124
            |:....|:.|.:.||    ||.:|:   ::.:..|  |||::    ...||:  .:.....|..:
plant    60 GLHQSILEAAKELLD----LPVEIK---LKNENHKAGHGYIT----MMSDGQ--PVHEGLGIDQV 111

  Fly   125 NAQNLPEEPLPGFA------DH---------ISTLATDFKALASFILQALAVSLDIPHTFFLEKH 174
            |    ..:...||:      ||         :...|.....|...:::.|..|.::      ||:
plant   112 N----DVQQCRGFSRLMWPDDHDDNDRFCETVHAYAKMQAELEQLVIRMLFESYNV------EKY 166

  Fly   175 SHMLSGDHDNMSSLRMLYYPPIVDDEPGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNE 239
            :....|....:  ||:|.|..:.:.||.:..:                                 
plant   167 TEKYIGGTRYL--LRLLKYRRLPNGEPNRKFI--------------------------------- 196

  Fly   240 VDGPNGQLFEHKLGNGAVIQCPPHVDYGTFTLLSQDSEGGLEVRLPGSEKWNRVGHLPGSILVNC 304
                                  .|.|....::|.|:...||.::....:.|......|...:|..
plant   197 ----------------------SHTDKSFISILHQNHITGLMLKSEKEDVWYHFTPSPTRFVVIA 239

  Fly   305 GEILNIWTQGRYPALQHRVIIPEQETIRARGRHSIAFFCHPDNITTISPTDLPNPDAVQDK 365
            |:.:..|:..|..|..|:|   |.|::..  |:|:.||...:.:       :..|:.:.||
plant   240 GDAIMAWSNDRIKACYHKV---EMESVEM--RYSLGFFSFQEGM-------ISTPEEMVDK 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 57/321 (18%)
AT1G15540NP_001322929.1 PLN02254 16..296 CDD:215142 57/321 (18%)

Return to query results.
Submit another query.