DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5346 and AT1G06620

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_172147.2 Gene:AT1G06620 / 837171 AraportID:AT1G06620 Length:365 Species:Arabidopsis thaliana


Alignment Length:398 Identity:86/398 - (21%)
Similarity:138/398 - (34%) Gaps:140/398 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VPIIDLAHCGIEEVPVKSVVNRVGHQLKKALSEKGMALLVNHGISDEKLKTAWDHLDDFVNLPPD 84
            :|.|||...|.:.:..:|:|.::|    .|..:.|...::||||..:.|:...|.:.:|.....:
plant    62 IPTIDLKGGGTDSITRRSLVEKIG----DAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTE 122

  Fly    85 IRQ-HYIRADGDKHGYVSRGQQQRFD-GKSPELRHAFNISTLNAQNLPEEPLP------------ 135
            ::: .|.|....|..|.|     .|| ..||.....   .||.....|:.|.|            
plant   123 VKKGFYSRDPASKMVYSS-----NFDLFSSPAANWR---DTLGCYTAPDPPRPEDLPATCGEMMI 179

  Fly   136 GFADHISTLATDFKALASFILQALAVSLDIPHTFFLEKHSHMLSGDHDNMSSLRML--YYPPIVD 198
            .::..:..|.   |.|...:.:||.::.           :|:  .|.|..:||.:|  ||||   
plant   180 EYSKEVMKLG---KLLFELLSEALGLNT-----------NHL--KDMDCTNSLLLLGHYYPP--- 225

  Fly   199 DEPGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEHKLGNGAVIQCPPH 263
                        |.         |||.                               .:....|
plant   226 ------------CP---------QPDL-------------------------------TLGLTKH 238

  Fly   264 VDYGTFTLLSQDSEGGLEVRLPGSEKWNRVGHLPGSILVNCGEILNIWTQGRYPALQHRVIIPEQ 328
            .|....|:|.||..|||:|.  ..:.|..|..:||:::||.|::|.:.|..::.:::|||:... 
plant   239 SDNSFLTILLQDHIGGLQVL--HDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANV- 300

  Fly   329 ETIRARGRHSIAFFCHPDNITTISPTDLPNPDAVQDKACLKQRKKSFKAAKERVYNAYQLIQKK- 392
                |..|.|:|.|.                             .|:..|..|||...:.|..: 
plant   301 ----AGPRISVACFF-----------------------------SSYLMANPRVYGPIKEILSEE 332

  Fly   393 ----FRDT 396
                :|||
plant   333 NPPNYRDT 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 77/361 (21%)
AT1G06620NP_172147.2 PLN02393 27..364 CDD:215220 86/398 (22%)

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