DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5346 and FLS4

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_680463.1 Gene:FLS4 / 836479 AraportID:AT5G63595 Length:279 Species:Arabidopsis thaliana


Alignment Length:312 Identity:61/312 - (19%)
Similarity:111/312 - (35%) Gaps:93/312 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PIIDLAHCGIEEVPVKSVVNRVGHQLKKALSEKGMALLVNHGISDEKLKTAWDHLDDFVNLPPDI 85
            |::||::...|         .|..::.||..|.|:..:|||||..|.::........|..||...
plant    26 PVVDLSNTNGE---------LVARKVAKASEEWGIFQVVNHGIPTELIRRLHKVDTQFFELPESK 81

  Fly    86 RQHYIRADGDK--HGYVSRGQQQRFDGKSPELRHAFNISTLNAQNLPEEPLPGFADHISTLATDF 148
            ::...:....|  .||.....|.|   :|....:.:..|::|....|:.| |.:.:.....|...
plant    82 KEAVAKPANSKEIQGYEMDDVQGR---RSHIFHNLYPSSSVNYAFWPKNP-PEYREVTEEFAKHA 142

  Fly   149 KALASFILQALAVSLDIPHTFFLEKHSHMLSGDHDNMSSLRMLYYPPIVDDEPGQNDVIKGRCQY 213
            |.||..||..|:           |...::          :::.||.|               |. 
plant   143 KQLAEEILGLLS-----------EGAGYL----------MKINYYRP---------------CP- 170

  Fly   214 SYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEHKLGNGAVIQCPPHVDYGTFTLLSQDSEG 278
                    :||:                               |:....|.|:...|||..:...
plant   171 --------EPDW-------------------------------VMGIKAHTDFNGLTLLIPNEIF 196

  Fly   279 GLEVRLPGSEKWNRVGHLPGSILVNCGEILNIWTQGRYPALQHRVIIPEQET 330
            ||:|.  ..::|..|.::..::::..|:.:...:.|||..:.||.::.:::|
plant   197 GLQVF--KEDRWLDVDYIYPAVIIIIGDQIMKMSNGRYNNVLHRALMDKKKT 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 61/312 (20%)
FLS4NP_680463.1 PLN02997 1..266 CDD:178576 61/312 (20%)

Return to query results.
Submit another query.