DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5346 and AT5G43450

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_199158.1 Gene:AT5G43450 / 834365 AraportID:AT5G43450 Length:362 Species:Arabidopsis thaliana


Alignment Length:358 Identity:82/358 - (22%)
Similarity:127/358 - (35%) Gaps:101/358 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VPIIDLAHCGIEEVPVKSVVNRVGHQLKKALSEKGMALLVNHGISDEKLKTAWDHLDDFVNLPPD 84
            ||||||   |......::||.   .::|.|....|...::||.:....|:...:.:..|....|.
plant    61 VPIIDL---GDRNTSSRNVVI---SKIKDAAENWGFFQVINHDVPLTVLEEIKESVRRFHEQDPV 119

  Fly    85 IRQHYIRADGDKHGYVSRGQQQRFDGKSPELRHAFNISTLNAQNLPEE-PLP------GFADHIS 142
            ::..|:..|.:|. :|.......:.......|.:|..........||| ||.      .:..|:.
plant   120 VKNQYLPTDNNKR-FVYNNDFDLYHSSPLNWRDSFTCYIAPDPPNPEEIPLACRSAVIEYTKHVM 183

  Fly   143 TLATDFKALASFILQALAVSLDIPHTFFLEKHSHMLSGDHDNMSSLRML--YYPPIVDDEPGQND 205
            .|..     ..|.|.:.|:.||          |..|. ..|.:..|.||  ||||          
plant   184 ELGA-----VLFQLLSEALGLD----------SETLK-RIDCLKGLFMLCHYYPP---------- 222

  Fly   206 VIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEHKLGNGAVIQCPPHVDYGTFT 270
                 |.         |||.                               .:....|.|....|
plant   223 -----CP---------QPDL-------------------------------TLGISKHTDNSFLT 242

  Fly   271 LLSQDSEGGLEVRLPGSEKWNRVGHLPGSILVNCGEILNIWTQGRYPALQHRVIIPEQETIRARG 335
            ||.||..|||:|.  ..:.|..|..:||:::||.|:.:.:.|..::.:::||| .|.::    |.
plant   243 LLLQDQIGGLQVL--HEDYWVDVPPVPGALVVNIGDFMQLITNDKFLSVEHRV-RPNKD----RP 300

  Fly   336 RHSIAFFCHPDNITTISPTDL---PNPDAVQDK 365
            |.|:|.|..    :::||...   |..|.:.|:
plant   301 RISVACFFS----SSLSPNSTVYGPIKDLLSDE 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 82/358 (23%)
AT5G43450NP_199158.1 PLN02947 23..350 CDD:215510 82/358 (23%)

Return to query results.
Submit another query.