DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5346 and DMR6

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_197841.1 Gene:DMR6 / 832524 AraportID:AT5G24530 Length:341 Species:Arabidopsis thaliana


Alignment Length:406 Identity:84/406 - (20%)
Similarity:139/406 - (34%) Gaps:120/406 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TLLSRSVVPIIDLAHCG----IEEVPV--KSVVNR--VGHQLKKALSEKGMALLVNHGIS----D 65
            ||....|.||.|.....    :|:.|:  .|..:|  :..|:.:|.:..|...::|||::    |
plant    14 TLPENYVRPISDRPRLSEVSQLEDFPLIDLSSTDRSFLIQQIHQACARFGFFQVINHGVNKQIID 78

  Fly    66 EKLKTAWDHLDDFVNLPPDIRQHYIRADGDKHGYVSRGQQQRFDGKSPELR--------HAFNIS 122
            |.:..|    .:|.::..:.:......|..|...:|..    |:.|..|:.        |.:.|.
plant    79 EMVSVA----REFFSMSMEEKMKLYSDDPTKTTRLSTS----FNVKKEEVNNWRDYLRLHCYPIH 135

  Fly   123 TLNAQNLPEEPLPGFADHISTLATDFKALASFILQALAVSLDIPHTFFL----EKHSHMLSGDHD 183
            .. ....|..| |.|.:.:|..:.:.:.:...|.:.::.||.:...:..    |:..||      
plant   136 KY-VNEWPSNP-PSFKEIVSKYSREVREVGFKIEELISESLGLEKDYMKKVLGEQGQHM------ 192

  Fly   184 NMSSLRMLYYPPIVDDEPGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLF 248
                 .:.||||..:.|                                                
plant   193 -----AVNYYPPCPEPE------------------------------------------------ 204

  Fly   249 EHKLGNGAVIQCPPHVDYGTFTLLSQDSE-GGLEVRLPGSEKWNRVGHLPGSILVNCGEILNIWT 312
               |..|    .|.|.|....|:|.||:. .||::.:.|  :|..|...|.:.::|.|:.|...:
plant   205 ---LTYG----LPAHTDPNALTILLQDTTVCGLQILIDG--QWFAVNPHPDAFVINIGDQLQALS 260

  Fly   313 QGRYPALQHRVIIPEQETIRARGRHSIAFFCHPDNITTISPTDLPNPDAVQDKACLKQRKKSFKA 377
            .|.|.::.||.:     |.....|.|:|.|..|.:...:||.. |..:|..|:.  |...|.|  
plant   261 NGVYKSVWHRAV-----TNTENPRLSVASFLCPADCAVMSPAK-PLWEAEDDET--KPVYKDF-- 315

  Fly   378 AKERVYNAYQLIQKKF 393
                   .|....|||
plant   316 -------TYAEYYKKF 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 74/370 (20%)
DMR6NP_197841.1 PLN02639 1..340 CDD:178245 84/406 (21%)

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