DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5346 and AT5G12270

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_568260.1 Gene:AT5G12270 / 831102 AraportID:AT5G12270 Length:360 Species:Arabidopsis thaliana


Alignment Length:394 Identity:94/394 - (23%)
Similarity:145/394 - (36%) Gaps:121/394 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DTLLSRSVVPIIDLAHCGIEEVPVKSVVNRVGHQLKKALSEKGMALLVNHGISDEKLKTAWDHLD 76
            |.:|..|.||:||:::..         ...|..::..|.|:.|:..:|||||:..:.|.......
plant    48 DKILLGSPVPVIDVSNWN---------EPHVAREICHAASKLGLFQIVNHGIAPAEFKGVIAAAR 103

  Fly    77 DFVNLPPDIRQHYIRADGDKHGYVSRGQQQRFDGKSPELRHAFN---ISTLNAQN-LPEEPLPGF 137
            .|..||.:.|:.|.|...     ||         ::..|..:||   .|.|..:: |..|.||..
plant   104 GFFELPAEERRRYWRGSS-----VS---------ETAWLTTSFNPCIESVLEWRDFLKFEYLPQR 154

  Fly   138 ADHIST--------LATDFKALASFILQALAVSLDIPHTFFLEKHSHMLSGDHDNMSSLRM--LY 192
            .|..:|        :...||.:.....:.|.:.::..:|...|.:...|      |.::||  .|
plant   155 HDFAATWPSVCKEQVIDHFKRIKPITERILNILINNLNTIIDESNKETL------MGTMRMNFNY 213

  Fly   193 YPPIVDDEPGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEHKLGNGAV 257
            ||                      :|                        |...|   .:|.|. 
plant   214 YP----------------------KC------------------------PEPSL---AIGTGR- 228

  Fly   258 IQCPPHVDYGTFTLLSQDSEGGLEVRL-----PGSEKWNRVGHLPGSILVNCGEILNIWTQGRYP 317
                 |.|..|.|||.|  |.|:...|     ...:||..|..:||:|:||.|::|.|.:..||.
plant   229 -----HSDINTLTLLLQ--EDGVLSSLYARATEDGDKWIHVPPIPGAIVVNIGDVLQILSNDRYR 286

  Fly   318 ALQHRVIIPEQETIRARGRHSIAFFCHPDNITTISPTDLPNPDAVQDKACLKQRKKSFKAAKERV 382
            :::|.|::.     :...|.||..||.|.:.:.|.|  ||.   |.||      .......::.|
plant   287 SVEHCVVVN-----KYCSRVSIPVFCGPVHDSVIEP--LPE---VLDK------NNEMARYRKIV 335

  Fly   383 YNAY 386
            |:.|
plant   336 YSDY 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 87/364 (24%)
AT5G12270NP_568260.1 PLN02947 19..360 CDD:215510 94/394 (24%)

Return to query results.
Submit another query.