DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5346 and GA20OX3

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_196337.1 Gene:GA20OX3 / 830611 AraportID:AT5G07200 Length:380 Species:Arabidopsis thaliana


Alignment Length:355 Identity:90/355 - (25%)
Similarity:133/355 - (37%) Gaps:100/355 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VPIIDLAHCGIEEVPVKSVVNRVGHQLKKALSEKGMALLVNHGISDEKLKTAWDHLDDFVNLPPD 84
            ||:||||.....:..:.|...|:   :.||.::.|..|:.|||:.:..|..|:.|:|.|...|..
plant    58 VPLIDLAGFLSGDSCLASEATRL---VSKAATKHGFFLITNHGVDESLLSRAYLHMDSFFKAPAC 119

  Fly    85 IRQHYIRADGDKHGYVSR--GQQQRFDGKSPELRHAFNISTLNAQNLPEEPL------------- 134
            .:|...|..|:..||.|.  |   ||..|.|..      .||:.:..|||.:             
plant   120 EKQKAQRKWGESSGYASSFVG---RFSSKLPWK------ETLSFKFSPEEKIHSQTVKDFVSKKM 175

  Fly   135 -PGFADH---ISTLATDFKALASFILQALAVSLDIPHTFFLEKHSHMLSGDHDNMSSLRMLYYPP 195
             .|:.|.   ....|.....|:..|::.|.:||.:...:|.|..       .|:.|..|:.||| 
plant   176 GDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFF-------EDSDSIFRLNYYP- 232

  Fly   196 IVDDEPGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEHKLGNGAVIQC 260
                          :|:         ||                         |..||.|     
plant   233 --------------QCK---------QP-------------------------ELALGTG----- 244

  Fly   261 PPHVDYGTFTLLSQDSEGGLEVRLPGSEKWNRVGHLPGSILVNCGEILNIWTQGRYPALQHRVII 325
             ||.|..:.|:|.||..|||:|.:  ..||..:...|.:.:||.|:.....|.|||.:..||.::
plant   245 -PHCDPTSLTILHQDQVGGLQVFV--DNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVV 306

  Fly   326 PEQETIRARGRHSIAFFCHPDNITTISPTD 355
            ..:     |.|.:.|||..|.....:.|.:
plant   307 NSE-----RERKTFAFFLCPKGEKVVKPPE 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 90/355 (25%)
GA20OX3NP_196337.1 PLN02276 17..380 CDD:215156 90/355 (25%)

Return to query results.
Submit another query.