DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5346 and LDOX

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_194019.1 Gene:LDOX / 828387 AraportID:AT4G22880 Length:356 Species:Arabidopsis thaliana


Alignment Length:405 Identity:100/405 - (24%)
Similarity:163/405 - (40%) Gaps:119/405 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VPIIDLAHCGIEEVPVKSVVNRVGHQLKKALSEKGMALLVNHGI-SD--EKLKTAWDHLDDFVNL 81
            ||.|||.:  ||....|...|.: .:||||..:.|:..|:|||| :|  |::|.|.   ::|.:|
plant    47 VPTIDLKN--IESDDEKIRENCI-EELKKASLDWGVMHLINHGIPADLMERVKKAG---EEFFSL 105

  Fly    82 PPDIRQHYI--RADGDKHGYVSR------GQQQ----RFDGKSPELRHAFNISTLNAQNLPEEPL 134
            ..:.::.|.  :|.|...||.|:      ||.:    .|....||.:...:|       .|:.| 
plant   106 SVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSI-------WPKTP- 162

  Fly   135 PGFADHI---STLATDFKALASFILQALAVSLDI-PHTFFLEKHSHMLSGDHDNMSSLRMLYYPP 195
               :|:|   |..|...:.||:.:.:||:|.|.: |..  |||.   :.|..:.:..:::.||| 
plant   163 ---SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDR--LEKE---VGGLEELLLQMKINYYP- 218

  Fly   196 IVDDEPGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEHKLGNGAVIQC 260
                          :|.         ||                         |..||..|    
plant   219 --------------KCP---------QP-------------------------ELALGVEA---- 231

  Fly   261 PPHVDYGTFTLLSQDSEGGLEVRLPGSEKWNRVGHLPGSILVNCGEILNIWTQGRYPALQHRVII 325
              |.|....|.:..:...||::...|  ||.....:|.||:::.|:.|.|.:.|:|.::.||.::
plant   232 --HTDVSALTFILHNMVPGLQLFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLV 292

  Fly   326 PEQETIRARGRHSIAFFCHPDNITTISPTD----LPNPDAVQDKACLKQRKKSFKAAKERVYNAY 386
            .:::.     |.|.|.||.|       |.|    .|.|:.|..::..|...::|....|     :
plant   293 NKEKV-----RISWAVFCEP-------PKDKIVLKPLPEMVSVESPAKFPPRTFAQHIE-----H 340

  Fly   387 QLIQKKFRDTYSSNN 401
            :|..|:..:..|..|
plant   341 KLFGKEQEELVSEKN 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 93/368 (25%)
LDOXNP_194019.1 PLN03178 1..356 CDD:215614 100/405 (25%)

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