DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5346 and AT4G22870

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001154266.1 Gene:AT4G22870 / 828386 AraportID:AT4G22870 Length:153 Species:Arabidopsis thaliana


Alignment Length:137 Identity:36/137 - (26%)
Similarity:59/137 - (43%) Gaps:37/137 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 VDYGTFTL---LSQDS--EGGLEV---RLPG-------------SEKWNRVGHLPGSILVNCGEI 307
            ::|.|..:   ||||.  .|.:.|   |:|.             ..||.....:|.||:::.|:.
plant     7 INYDTSIIRGFLSQDDVIVGDMTVEKHRIPRKYIRGMNLKDLFYEGKWVTAKCVPNSIVMHIGDT 71

  Fly   308 LNIWTQGRYPALQHRVIIPEQETIRARGRHSIAFFCHPDNITTISPTD----LPNPDAVQDKACL 368
            |.|.:.|:|.::.||.::.:::.     |.|.|.||.|       |.|    .|.||.|..::..
plant    72 LEILSNGKYKSILHRGLVNKEKV-----RISWAVFCEP-------PKDKIVLKPLPDMVSVESPA 124

  Fly   369 KQRKKSF 375
            |...::|
plant   125 KFPPRTF 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 34/126 (27%)
AT4G22870NP_001154266.1 pepsin_retropepsin_like <4..>31 CDD:472175 7/23 (30%)
PLN03178 <48..153 CDD:215614 26/96 (27%)

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