DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5346 and AT4G16330

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001190740.1 Gene:AT4G16330 / 827327 AraportID:AT4G16330 Length:364 Species:Arabidopsis thaliana


Alignment Length:420 Identity:87/420 - (20%)
Similarity:130/420 - (30%) Gaps:145/420 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KTKSSDDKLDTLLSRSVVPIIDL-AHCGIEEVPVKSVVNRVGHQLKKALSEK----GMALLVNHG 62
            ||.|...|...|||.|....:|| :|...:...:.:|........::|:.:.    |...::|||
plant    34 KTTSDSHKSGFLLSTSSHRKLDLISHYPGDAASIPTVDLSSSDSAREAIGDACRDWGAFHVINHG 98

  Fly    63 I--------------------SDEKLKTAWDHLDDFVNLPPDIRQHYIRADGDKHGYVSR----- 102
            :                    .:|||:.|.|                 .......||.||     
plant    99 VPIHLLDRMRSLGLSFFQDSPMEEKLRYACD-----------------STSAASEGYGSRMLLGA 146

  Fly   103 ------GQQQRFDGKSPELRHAFNISTLNAQNLPEEPLPGFADHISTLATDFKALASFILQALAV 161
                  ..:..||      .|.|..|..|..:.|..| ..:...:.....:.|.||..:|..::.
plant   147 KDDVVLDWRDYFD------HHTFPPSRRNPSHWPIHP-SDYRQVVGEYGDEMKKLAQMLLGLISE 204

  Fly   162 SLDIPHTFFLEKHSHMLSGDHDNMSSLRMLYYPPIVDDEPGQNDVIKGRCQYSYQRCLSNQPDFR 226
            ||.:|.:...|....:       ..::.:.||||               |.         ||:. 
plant   205 SLGLPCSSIEEAVGEI-------YQNITVTYYPP---------------CP---------QPEL- 237

  Fly   227 PEHNPRDEDDLNEVDGPNGQLFEHKLGNGAVIQCPPHVDYGTFTLLSQDSEGGLEVRLPGSEKWN 291
                                          .:....|.|:|..|||.||...||:  |....:|.
plant   238 ------------------------------TLGLQSHSDFGAITLLIQDDVEGLQ--LYKDAQWL 270

  Fly   292 RVGHLPGSILVNCGEILNIWTQGRYPALQHRVIIPEQETIRARGRHSIAFFCHPDNITTISPTDL 356
            .|..:..:||:...:...|.|.|||.:.|||.:     |...|.|.|:|.|..|.....|:|...
plant   271 TVPPISDAILILIADQTEIITNGRYKSAQHRAV-----TNANRARLSVATFHDPSKTARIAPVSQ 330

  Fly   357 PNPDAVQDKACLKQRKKSFKAAKERVYNAY 386
            .:|.:.                ||.||..|
plant   331 LSPPSY----------------KEVVYGQY 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 74/381 (19%)
AT4G16330NP_001190740.1 PLN03176 <67..126 CDD:178720 9/58 (16%)
PLN03001 107..364 CDD:166642 70/347 (20%)

Return to query results.
Submit another query.