DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5346 and AT3G60290

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_191588.2 Gene:AT3G60290 / 825200 AraportID:AT3G60290 Length:357 Species:Arabidopsis thaliana


Alignment Length:435 Identity:95/435 - (21%)
Similarity:159/435 - (36%) Gaps:135/435 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TKSSDDKLDT----------LLSRSV------VPIIDLAH--------CGIEEVPVKSVVNRVGH 44
            |:|.|..:.|          :|..|:      :|:|||:.        |.|             |
plant    20 TESGDPHVPTRYILPPSQRPMLGPSIGTSTINLPVIDLSFLHDPLLRLCVI-------------H 71

  Fly    45 QLKKALSEKGMALLVNHGISDEKLKTAWDHLDDFVNLPPDIRQHYIR---ADGDKHGYVSRGQQQ 106
            :::.|....|...::|||||...:|.|.|....|.:||.|.:.|.:.   .:..::|........
plant    72 EIELACKGFGFFQVINHGISSAVVKDAQDSATRFFDLPADEKMHLVSDNFQEPVRYGTSINHSTD 136

  Fly   107 RFDGKSPELRHAFNISTLNAQNL-PEEPLPGFADHISTLATDFKALASFILQALAVSLDIPHTFF 170
            |.......::| ::....|..|| |..| |.:.:.:...|.....|...:::|::.||.:...:.
plant   137 RVHYWRDFIKH-YSHPLSNWINLWPSNP-PCYKEKVGKYAEATHVLHKQLIEAISESLGLEKNYL 199

  Fly   171 LEKHSHMLSGDHDNMSSLRMLYYPPIVDDEPGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDED 235
            .|                         :.|.| :.|:...|   |..|        ||.      
plant   200 QE-------------------------EIEEG-SQVMAVNC---YPAC--------PEP------ 221

  Fly   236 DLNEVDGPNGQLFEHKLGNGAVIQCPPHVDYGTFTLLSQDSEGGLEVRLPGSEKWNRVGHLPGSI 300
                         |..||      .|||.|||:.|:|.|.|| ||::: ..:..|..|.::.|::
plant   222 -------------EIALG------MPPHSDYGSLTILLQSSE-GLQIK-DCNNNWVCVPYIEGAL 265

  Fly   301 LVNCGEILNIWTQGRYPALQHRVII-PEQETIRARGRHSIAFFCHPDNITTISP-TDLPNPDAVQ 363
            :|..|:.:.:.:.|.|.::.|||.: .:.:.:.....||:...      ..||| |.|.|     
plant   266 IVQLGDQVEVMSNGIYKSVVHRVTVNKDYKRLSFASLHSLPMH------KKISPATQLVN----- 319

  Fly   364 DKACLKQRKKSFKAAKERVYNAY-------QLIQKKFRDTYSSNN 401
                  :.|.:  |..|..:|.:       .:.||:|.||....|
plant   320 ------ENKPA--AYGEFSFNDFLDYISRNDITQKRFIDTLRKKN 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 79/359 (22%)
AT3G60290NP_191588.2 PLN02904 1..357 CDD:178492 95/435 (22%)

Return to query results.
Submit another query.