DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5346 and JRG21

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_191156.1 Gene:JRG21 / 824763 AraportID:AT3G55970 Length:363 Species:Arabidopsis thaliana


Alignment Length:349 Identity:78/349 - (22%)
Similarity:135/349 - (38%) Gaps:91/349 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SVVPIIDLAHCGIEEVPVKSVVNRVGHQLKKALSEKGMALLVNHGISD---EKLKTAWDHLDDFV 79
            :.:|||||.....:::.:::   :...::.||..|.|...:||||:|.   ::.|..|   .:|.
plant    50 TTIPIIDLGRLYTDDLTLQA---KTLDEISKACRELGFFQVVNHGMSPQLMDQAKATW---REFF 108

  Fly    80 NLPPDIRQHYIRADGDKHGYVSRGQQQR---FDGKSPELRHAFNISTLNAQNLPEEPLPGFADHI 141
            |||.:::..:..:.....||.||...::   .|.......|....|..:....|..||     |.
plant   109 NLPMELKNMHANSPKTYEGYGSRLGVEKGAILDWSDYYYLHYQPSSLKDYTKWPSLPL-----HC 168

  Fly   142 STLATDF----KALASFILQALAVSLDIPHTFFLEKHSHMLSGDHDNMSSLRMLYYPPIVDDEPG 202
            ..:..|:    ..|...:::.|:.:|.:..    ::..:...|..::...||:.|||        
plant   169 REILEDYCKEMVKLCENLMKILSKNLGLQE----DRLQNAFGGKEESGGCLRVNYYP-------- 221

  Fly   203 QNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEHKLGNGAVIQCPPHVDYG 267
                   :|.         ||:.                               .:...||.|.|
plant   222 -------KCP---------QPEL-------------------------------TLGISPHSDPG 239

  Fly   268 TFTLLSQDSE-GGLEVRLPGS-EKWNRVGHLPGSILVNCGEILNIWTQGRYPALQHRVII-PEQE 329
            ..|:|..|.: ..|:||  || :.|..|...|.:.:||.|:.:.:.:...|.:::||||: ||.|
plant   240 GLTILLPDEQVASLQVR--GSDDAWITVEPAPHAFIVNMGDQIQMLSNSIYKSVEHRVIVNPENE 302

  Fly   330 TIRARGRHSIAFFCHPDNITTISP 353
                  |.|:|||.:|.....|.|
plant   303 ------RLSLAFFYNPKGNVPIEP 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 78/347 (22%)
JRG21NP_191156.1 PLN02393 1..363 CDD:215220 78/349 (22%)

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