DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5346 and LBO1

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_566685.1 Gene:LBO1 / 821696 AraportID:AT3G21420 Length:364 Species:Arabidopsis thaliana


Alignment Length:401 Identity:79/401 - (19%)
Similarity:146/401 - (36%) Gaps:129/401 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VPIIDLAHCGIEEVPVKSVVNRVGH--------QLKKALSEKGMALLVNHGISDEKLKTAWDHLD 76
            :|:|||           |.:::..:        :|.:|..:.|...::||||..|.::...:...
plant    55 IPVIDL-----------SKLSKPDNDDFFFEILKLSQACEDWGFFQVINHGIEVEVVEDIEEVAS 108

  Fly    77 DFVNLPPDIRQHYIRADGDKHGYVSRGQ------QQRFDG--------KSPELRHAFNISTLNAQ 127
            :|.::|.:.::.|....|...||   ||      .|:.|.        ..|::|        |.:
plant   109 EFFDMPLEEKKKYPMEPGTVQGY---GQAFIFSEDQKLDWCNMFALGVHPPQIR--------NPK 162

  Fly   128 NLPEEPLPGFADHISTLATDFKALASFILQALAVSLDIPHTFFLEKHSHMLSGDHDNMSSLRMLY 192
            ..|.:| ..|::.:...:.:.:.|...:|:.:|:||.:....|.|...       :.:.::||.|
plant   163 LWPSKP-ARFSESLEGYSKEIRELCKRLLKYIAISLGLKEERFEEMFG-------EAVQAVRMNY 219

  Fly   193 YPPIVDDEPGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEHKLGNGAV 257
            |||                      |.|  ||.                               |
plant   220 YPP----------------------CSS--PDL-------------------------------V 229

  Fly   258 IQCPPHVDYGTFTLLSQDSEGGLEVRLPGSEKWNRVGHLPGSILVNCGEILNIWTQGRYPALQHR 322
            :...||.|....|:|.|.....:.:::.....|..|..||.::::|.|:.:.:.:.|:|.:::||
plant   230 LGLSPHSDGSALTVLQQSKNSCVGLQILKDNTWVPVKPLPNALVINIGDTIEVLSNGKYKSVEHR 294

  Fly   323 VIIPEQETIRARGRHSIAFFCHPDNITTISPTDLPNPDAVQDKACLKQRKKSFKAAKERVYN--- 384
            .:     |.|.:.|.:|..|..|:....|.|..    :.|.|:.         ...|.|.||   
plant   295 AV-----TNREKERLTIVTFYAPNYEVEIEPMS----ELVDDET---------NPCKYRSYNHGD 341

  Fly   385 -AYQLIQKKFR 394
             :|..:..|.:
plant   342 YSYHYVSNKLQ 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 73/367 (20%)
LBO1NP_566685.1 PLN02758 1..362 CDD:215404 79/401 (20%)

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