DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5346 and AT3G12900

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_187896.1 Gene:AT3G12900 / 820473 AraportID:AT3G12900 Length:357 Species:Arabidopsis thaliana


Alignment Length:357 Identity:76/357 - (21%)
Similarity:126/357 - (35%) Gaps:116/357 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VGHQLKKALSEKGMALLVNHGISDEKLKTAWDHLDDFVNLPPDIRQHYIRADGDKHGYVSRGQQQ 106
            |..|:.:|....|...:||||:|.|.|:.......:|....|:.:..|::.       ||..:..
plant    72 VAKQIVEAAETLGFFQVVNHGVSVELLELLKSSAHEFFAQAPEEKSMYLKE-------VSPSKLV 129

  Fly   107 RFDGKS--PELRHAFNISTLNAQNLPEEPLPGFADHISTLAT-DFKALASFILQALAVSLDIPHT 168
            :: |.|  |:...|..                :.|::|.|.| |.:||..:......|:|:    
plant   130 KY-GTSFVPDKEKAIE----------------WKDYVSMLYTNDSEALQHWPQPCREVALE---- 173

  Fly   169 FFLEKHSHMLSG-------------DHDNMSSL------RMLYYPPIVDDEPGQNDVIKGRCQYS 214
             ||.....|:..             :.:.|:.|      .|.|||                    
plant   174 -FLNSSMEMVKNVVNILMENVGVTLEEEKMNGLMGTKMVNMNYYP-------------------- 217

  Fly   215 YQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEHKLGNGAVIQCPPHVDYGTFTLLSQDSEGG 279
              .|                        |:.:|   .:|.|.      |.|.|..|:|.||..||
plant   218 --TC------------------------PSPEL---TVGVGR------HSDMGMLTVLLQDGIGG 247

  Fly   280 LEVRLPGSEKWNRVGHLPGSILVNCGEILNIWTQGRYPALQHRVIIPEQETIRARGRHSIAFFCH 344
            |.|:|...| |..:..:.|::::|.|:.|.|.:.|:|.:.:|||     .|.....|.|:..|..
plant   248 LYVKLDNGE-WAEIPPVHGALVINIGDTLQILSNGKYKSAEHRV-----RTTNIGSRVSVPIFTA 306

  Fly   345 PDNITTISPTDLPNPDAVQDKACLKQRKKSFK 376
            |:....:.|.    |:.|:.....:.::..|:
plant   307 PNPSQKVGPL----PEVVKRDGVARYKEFLFQ 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 75/345 (22%)
AT3G12900NP_187896.1 PLN02947 20..330 CDD:215510 75/351 (21%)

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