DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5346 and AT2G38240

DIOPT Version :10

Sequence 1:NP_651058.1 Gene:CG5346 / 42653 FlyBaseID:FBgn0038981 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_181359.1 Gene:AT2G38240 / 818403 AraportID:AT2G38240 Length:353 Species:Arabidopsis thaliana


Alignment Length:377 Identity:81/377 - (21%)
Similarity:137/377 - (36%) Gaps:113/377 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VVPIIDLAHCGIEEVPVKSVVNRVGHQ--------------------------------LKKALS 51
            :|.:..|:..|:..||.:.|  :..||                                ::.|..
plant     9 IVSVQSLSQTGVPTVPNRYV--KPAHQRPVFNTTQSDAGIEIPVLDMNDVWGKPEGLRLVRSACE 71

  Fly    52 EKGMALLVNHGISD---EKLKTAWDHLDDFVNLPPDIRQHYIRADGDKHGYVSR---GQQQRFDG 110
            |.|...:||||::.   |:::.||   .:|..||.:.::.|..:.....||.||   .:..:.|.
plant    72 EWGFFQMVNHGVTHSLMERVRGAW---REFFELPLEEKRKYANSPDTYEGYGSRLGVVKDAKLDW 133

  Fly   111 KSPELRHAFNISTLNAQNLPEEPLPGFADHISTLATDFKALASFILQALAVSLDI-PHTFFLEKH 174
            ......:....|..|....|.:| |...:.|.....:.:.|...:.:.|:.||.: |:     |.
plant   134 SDYFFLNYLPSSIRNPSKWPSQP-PKIRELIEKYGEEVRKLCERLTETLSESLGLKPN-----KL 192

  Fly   175 SHMLSGDHDNMSSLRMLYYPPIVDDEPGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNE 239
            ...|.|.....:|||..:||                      :|                     
plant   193 MQALGGGDKVGASLRTNFYP----------------------KC--------------------- 214

  Fly   240 VDGPNGQLFEHKLGNGAVIQCPPHVDYGTFTLLSQDSE-GGLEVRLPGSEKWNRVGHLPGSILVN 303
               |..||   .||..:      |.|.|..|:|..|.: .||:||  ..:.|..:..:|.:::||
plant   215 ---PQPQL---TLGLSS------HSDPGGITILLPDEKVAGLQVR--RGDGWVTIKSVPNALIVN 265

  Fly   304 CGEILNIWTQGRYPALQHRVIIPEQETIRARGRHSIAFFCHPDNITTISPTD 355
            .|:.|.|.:.|.|.:::|:||:..     ...|.|:|||.:|.:...:.|.:
plant   266 IGDQLQILSNGIYKSVEHQVIVNS-----GMERVSLAFFYNPRSDIPVGPIE 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5346NP_651058.1 PcbC 20..366 CDD:442714 81/376 (22%)
AT2G38240NP_181359.1 PLN02393 1..353 CDD:215220 81/377 (21%)

Return to query results.
Submit another query.