DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta1R and taar12j

DIOPT Version :10

Sequence 1:NP_651057.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001076380.1 Gene:taar12j / 795139 ZFINID:ZDB-GENE-041014-59 Length:340 Species:Danio rerio


Alignment Length:340 Identity:105/340 - (30%)
Similarity:165/340 - (48%) Gaps:41/340 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 VFVKCFIIGFIILAAILGNMLVIVSVMRHRKLRIITNYFVVSLAVADMLVALCAMTFNASVMISG 171
            |.:..|:: .:||..:.||:|:|:|:...::|:..|:..|.|||.:|.|:....|.::....:.|
Zfish    35 VTMYAFMV-LMILTTVFGNLLIIISISHFKQLQSPTHLIVRSLAASDCLLGSLVMPYSMVRSVEG 98

  Fly   172 KWMFGSVMCDMWNSFDVYFSTASIMHLCCISVDRYYAIVQPLDYPLIMTQRRVFIMLLMVWLSPA 236
            .|..|.|:|.:.:|.|:.||.:|::||..:|||||:||..||.|.:.:|...|.:..:..||...
Zfish    99 CWYLGDVVCKVHSSLDMTFSISSLIHLSLVSVDRYWAICDPLRYRMRVTNNTVIVFTVFTWLFSF 163

  Fly   237 LLSFLPICSG----WYTTTENYKYLKSNPHICEFKVNKAYAIVSSSMSFWIPGIVMLSMYYRIYQ 297
            :.||..:.||    ...|.....|...:   |....||.:.::.|.::|::|..:|.|:|.:|:.
Zfish   164 VYSFSVVFSGVNRIGLETFIMQVYCVGS---CVLFFNKQWGLICSLLTFFLPCTIMSSLYMKIFH 225

  Fly   298 EADRQERLVYRSKVAALLLEKHLQISQIPKPRPSIQVEQSTISTMRRERKAARTLGIIMSAFLIC 362
            .| |:...|...:|...|..:                     |:.:||.|||:||.|:|..|.:|
Zfish   226 VA-RKHAKVMSERVTGGLKSQ---------------------SSAQREGKAAKTLAIVMGVFYLC 268

  Fly   363 WLPFFLWYIVSSLCDSCITPRLLVGILFWIGYFNSALNPIIYAYFNRDFRAAFKKTLKSLFPYAF 427
            |||||....|....:.. ||..:...|.|.|||||..||:||.:|...|:.||...:.:      
Zfish   269 WLPFFTATAVDPFLNFS-TPVHVFDALVWFGYFNSTCNPLIYGFFYPRFQKAFNILIST------ 326

  Fly   428 YFCRRGRGRDDDRDL 442
            |.|    |..|...|
Zfish   327 YIC----GSSDSHTL 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta1RNP_651057.1 7tmA_DmOct-betaAR-like 109..415 CDD:320194 97/309 (31%)
TM helix 1 109..135 CDD:320194 8/25 (32%)
TM helix 2 142..168 CDD:320194 8/25 (32%)
TM helix 3 180..210 CDD:320194 14/29 (48%)
TM helix 4 222..245 CDD:320194 5/22 (23%)
TM helix 5 269..298 CDD:320194 9/28 (32%)
TM helix 6 343..373 CDD:320194 16/29 (55%)
TM helix 7 383..408 CDD:320194 11/24 (46%)
taar12jNP_001076380.1 7tmA_TAAR2_3_4 35..320 CDD:320437 98/311 (32%)
TM helix 1 36..62 CDD:320437 8/26 (31%)
TM helix 2 69..95 CDD:320437 8/25 (32%)
TM helix 3 107..137 CDD:320437 14/29 (48%)
TM helix 4 149..172 CDD:320437 5/22 (23%)
TM helix 5 197..226 CDD:320437 9/28 (32%)
TM helix 6 249..279 CDD:320437 16/29 (55%)
TM helix 7 288..313 CDD:320437 11/24 (46%)

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