DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Octbeta1R and Taar6

DIOPT Version :9

Sequence 1:NP_001262843.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_783174.1 Gene:Taar6 / 294124 RGDID:631384 Length:345 Species:Rattus norvegicus


Alignment Length:321 Identity:103/321 - (32%)
Similarity:152/321 - (47%) Gaps:52/321 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 IIGFIILAAILGNMLVIVSVMRHRKLRIITNYFVVSLAVADMLVALCAMTFNASVMISGKWMFGS 177
            :.||..:.|:.||:||::|::..::|...||:.:.|||.||..|.:..|.|:....|...|.||.
  Rat    38 VFGFGAVLAVFGNLLVMISILHFKQLHSPTNFLIASLACADFWVGVSVMPFSMVRSIESCWYFGR 102

  Fly   178 VMCDMWNSFDVYFSTASIMHLCCISVDRYYAIVQPLDYPLIMTQRRVFIMLLMVWLSPALLSFLP 242
            ..|......||.|..:|:.||..||:|||.|:..||.||...|.....|.:.:.|:.|...|...
  Rat   103 SFCTFHTCCDVAFCYSSLFHLSFISIDRYIAVTDPLVYPTKFTVSVSGICISISWILPLAYSGAV 167

  Fly   243 ICSGWYTT-TENYKYLKSNPHICEFKVNKAYAIVSSSMSFWIPGIVMLSMYYRIYQEADRQERLV 306
            ..:|.|.. .|......:....|:..||:.:.:: ..:||.||.:||:.:|..|:..|.:|.:.:
  Rat   168 FYTGVYADGLEEVSDAVNCVGGCQVVVNQNWVLI-DFLSFLIPTLVMIILYGNIFLVARQQAKKI 231

  Fly   307 -------------YRSKVAALLLEKHLQISQIPKPRPSIQVEQSTISTMRRERKAARTLGIIMSA 358
                         |:::||                              |||||||:||||.:.|
  Rat   232 ETVGNKAESSSESYKARVA------------------------------RRERKAAKTLGITVVA 266

  Fly   359 FLICWLPFFLWYIVSSLCDS---CITPRLLVGILFWIGYFNSALNPIIYAYFNRDFRAAFK 416
            |:|.|||    |.:.||.|:   .|||..:..|..|..|:|||:||:|||.|...|:.|.|
  Rat   267 FMISWLP----YSIDSLVDAFMGFITPAYIYEICVWCAYYNSAMNPLIYALFYPWFKKAIK 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta1RNP_001262843.1 7tm_4 112..>231 CDD:304433 42/117 (36%)
7tm_1 124..404 CDD:278431 93/296 (31%)
Taar6NP_783174.1 7tmA_TAAR6_8_9 33..322 CDD:320439 101/318 (32%)
TM helix 1 35..59 CDD:320439 8/20 (40%)
TM helix 2 68..90 CDD:320439 9/21 (43%)
TM helix 3 106..128 CDD:320439 7/21 (33%)
TM helix 4 151..167 CDD:320439 4/15 (27%)
TM helix 5 195..218 CDD:320439 7/23 (30%)
TM helix 6 257..279 CDD:320439 12/25 (48%)
TM helix 7 290..315 CDD:320439 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.