DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta1R and Chrm5

DIOPT Version :10

Sequence 1:NP_651057.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_991352.2 Gene:Chrm5 / 213788 MGIID:109248 Length:532 Species:Mus musculus


Alignment Length:532 Identity:121/532 - (22%)
Similarity:194/532 - (36%) Gaps:203/532 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 SHLAL-------VFVKCFIIGFIILAAILGNMLVIVSVMRHRKLRIITNYFVVSLAVADMLVALC 159
            :|.||       |.....:...:.|..|:||:||::|...:.:|:.:.||:::|||.||:::.:.
Mouse    18 NHQALERHGLWEVITIAAVTAVVSLMTIVGNVLVMISFKVNSQLKTVNNYYLLSLACADLIIGIF 82

  Fly   160 AMTFNASVMISGKWMFGSVMCDMWNSFDVYFSTASIMHLCCISVDRYYAIVQPLDYPLIMTQRRV 224
            :|....:.::.|:|:.||:.||:|.:.|...|.||:|:|..||.|||::|.:||.|....|.:|.
Mouse    83 SMNLYTTYILMGRWVLGSLACDLWLALDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTPKRA 147

  Fly   225 FIMLLMVWLSPALLSFLPICSGWYTTTENYKYLKSN----PHIC--EFKVNKAYAIVSSSMSFWI 283
            .||:.:.||...:|        |......::||...    |..|  :|.........::..:|:|
Mouse   148 GIMIGLAWLVSFIL--------WAPAILCWQYLVGKRTVPPDECQIQFLSEPTITFGTAIAAFYI 204

  Fly   284 PGIVMLSMYYRIYQEADRQER----LVYRSKVAALLLEK--H--LQISQIPKPRPSIQV---EQS 337
            |..||..:|.|||:|.:::.:    |.....||.:...|  |  |..|....||||:..   .|:
Mouse   205 PVSVMTILYCRIYRETEKRTKDLADLQGSDSVAEVKKRKPAHRTLLRSFFSCPRPSLAQRVRNQA 269

  Fly   338 TISTMRR---------------------------------------------------------- 344
            :.|:.||                                                          
Mouse   270 SWSSSRRSTSTTGKPTQATDLSADWEKAEQVTNCSSCPSSEDEAKATTDPVFQVVCKNEAKESPG 334

  Fly   345 ----------------------------------------------------------------- 344
                                                                             
Mouse   335 KEFNTQETKETFVSPRTENNDYDTPKYFLSPGAAHRLKSQKCVAYKFRLVVKADGTQETNNGCRK 399

  Fly   345 -------------------------------------ERKAARTLGIIMSAFLICWLPFFLWYIV 372
                                                 |||||:||..|:.||:|.|.|:.:..:|
Mouse   400 VKIMPCSFPVSKDPSTKGLDPHLSHQMTKRKRMVLVKERKAAQTLSAILLAFIITWTPYNIMVLV 464

  Fly   373 SSLCDSCITPRLLVGILFWIGYFNSALNPIIYAYFNRDFRAAFKKTLKSLFPYAFYFCRRGRGRD 437
            |:.||.|: |..|..:.:|:.|.||.:|||.||..||.||..||..|         .||..:.:.
Mouse   465 STFCDKCV-PVTLWHLGYWLCYVNSTINPICYALCNRTFRKTFKLLL---------LCRWKKKKV 519

  Fly   438 DDRDLEFGGPSR 449
            ::: |.:.|.|:
Mouse   520 EEK-LYWQGNSK 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta1RNP_651057.1 7tmA_DmOct-betaAR-like 109..415 CDD:320194 109/482 (23%)
TM helix 1 109..135 CDD:320194 7/25 (28%)
TM helix 2 142..168 CDD:320194 8/25 (32%)
TM helix 3 180..210 CDD:320194 14/29 (48%)
TM helix 4 222..245 CDD:320194 6/22 (27%)
TM helix 5 269..298 CDD:320194 9/28 (32%)
TM helix 6 343..373 CDD:320194 15/189 (8%)
TM helix 7 383..408 CDD:320194 10/24 (42%)
Chrm5NP_991352.2 7tmA_mAChR_M5 31..>225 CDD:320427 61/201 (30%)
TM helix 1 32..58 CDD:320427 7/25 (28%)
TM helix 2 65..91 CDD:320427 8/25 (32%)
TM helix 3 103..133 CDD:320427 14/29 (48%)
TM helix 4 145..168 CDD:320427 7/30 (23%)
TM helix 5 190..219 CDD:320427 9/28 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..290 4/24 (17%)
7tm_GPCRs <435..514 CDD:475119 37/88 (42%)
TM helix 6 441..463 CDD:410628 9/21 (43%)
TM helix 7 474..499 CDD:410628 10/24 (42%)

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