DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta1R and LOC100495677

DIOPT Version :10

Sequence 1:NP_651057.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_002932874.2 Gene:LOC100495677 / 100495677 XenbaseID:XB-GENE-29082783 Length:337 Species:Xenopus tropicalis


Alignment Length:330 Identity:80/330 - (24%)
Similarity:147/330 - (44%) Gaps:63/330 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 IILAAILG----NMLVIVSVMRHRKLRIITNYFVVSLAVADMLVALCAM---TFNASVMISGKWM 174
            |::|..:|    |.|::|....|.|||..|....::|::.|::..:|.:   .:| |:...|.:.
 Frog    11 IMIATSIGTVGANALLLVLFASHLKLRTDTWALTLNLSICDLIFGMCVVPIAIYN-SLFQGGIFA 74

  Fly   175 FGSVMCDMWNSFDVYFSTASIMHLCCISVDRYYAIVQPLDYPLIMTQRRVFIMLLMVWLSPALLS 239
            .|.:.|.:.....|....||:..|...::|::..|..||.|..::|::|:..:|.::|:...:::
 Frog    75 EGGIACQLLGFLFVLLQLASLNSLVWATIDKFAEIGFPLRYAQLITKKRIMFILAILWIYAIVVA 139

  Fly   240 FLPICS-GWYTTTEN-YKYLKS-NPHICEFKVNKAYAIVSSSMSFWIP--GIVMLSMYYRIYQEA 299
            .||... |.|:..:: |..|.: .|.      ..||:::..::...:|  ||.:|  |..|...|
 Frog   140 ALPFMGFGVYSFNKDVYMCLPAFGPS------TTAYSVLFLTVGVLVPITGISIL--YLSIIHIA 196

  Fly   300 DRQERLVYRSKVAALLL-EKHLQISQIPKPRPSIQVEQSTISTMRRERKAARTLGIIMSAF--LI 361
            .      |::|....:. ::|.....|.             |..|      .||.:|:|||  |:
 Frog   197 R------YQAKRGTFVCNDQHCYYVPIR-------------SYFR------NTLVLIVSAFYLLV 236

  Fly   362 CWLP-----FFLWYIVSSLCDSCITPRLLVGILFWIGYFNSALNPIIYAYFNRDFRAAFK---KT 418
            ||||     |:..:..|::      |.:...:..|:....|.|||.|.:...|::|.|.:   :.
 Frog   237 CWLPSVIISFYETFYTSNV------PVIAKMVSIWLVVLTSTLNPWINSLAQRNYRRALREGWRK 295

  Fly   419 LKSLF 423
            ||.:|
 Frog   296 LKRIF 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta1RNP_651057.1 7tmA_DmOct-betaAR-like 109..415 CDD:320194 76/317 (24%)
TM helix 1 109..135 CDD:320194 6/21 (29%)
TM helix 2 142..168 CDD:320194 6/28 (21%)
TM helix 3 180..210 CDD:320194 6/29 (21%)
TM helix 4 222..245 CDD:320194 5/22 (23%)
TM helix 5 269..298 CDD:320194 8/30 (27%)
TM helix 6 343..373 CDD:320194 13/36 (36%)
TM helix 7 383..408 CDD:320194 6/24 (25%)
LOC100495677XP_002932874.2 7tm_classA_rhodopsin-like 8..277 CDD:410626 73/305 (24%)
TM helix 1 8..33 CDD:410626 6/21 (29%)
TM helix 2 40..66 CDD:410626 5/26 (19%)
TM helix 3 80..110 CDD:410626 6/29 (21%)
TM helix 4 123..142 CDD:410626 3/18 (17%)
TM helix 5 166..191 CDD:410626 7/26 (27%)
TM helix 6 217..248 CDD:410626 15/49 (31%)
TM helix 7 257..277 CDD:410626 5/19 (26%)

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