DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta1R and taar19b

DIOPT Version :9

Sequence 1:NP_001262843.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_021335134.1 Gene:taar19b / 100333348 ZFINID:ZDB-GENE-091116-74 Length:334 Species:Danio rerio


Alignment Length:359 Identity:98/359 - (27%)
Similarity:164/359 - (45%) Gaps:63/359 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 VAGQAQDIQASEGSTDDADGS----SHLALVFVKCFIIGFIILAAILGNMLVIVSVMRHRKLRII 141
            :|.:.:| |.::....|.:.|    .|....::....:.|:....:..|:|||:|:...:||...
Zfish     1 MAYETED-QETQYCFPDINSSCVKEQHSTNGYIIYLFVSFLSAWTVFLNLLVIISISHFKKLHTP 64

  Fly   142 TNYFVVSLAVADMLVALCAMTFNASVMISGKWMFGSVMCDMWNSFDVYFSTASIMHLCCISVDRY 206
            ||..|:||||||:|:.|..|...|..:|...|.||...|...........:||:.:|..|:||||
Zfish    65 TNMIVLSLAVADLLIGLIVMPVEAVKLIETCWYFGDTFCGFTLILIGVIPSASLGNLVLIAVDRY 129

  Fly   207 YAIVQPLDYPLIMTQRRVFIMLLMVWLSPALLSFLPICSGWYTTTENYKYLKSNPHICEFKVNKA 271
            .|:..||.||..:|...:.:.:.:.|:         ..|.:.||...|.......|    :.::.
Zfish   130 AAVCHPLLYPQKITMANMLMSICLSWV---------YYSTYITTLVIYNRYFDTSH----RTDEC 181

  Fly   272 YAIVSSSMSF-WI----------PGIVMLSMYYRIYQEADRQERLVYRSKVAALLLEKHLQISQI 325
            |......||| ||          |.::::::|.||:....:|.::                |:.:
Zfish   182 YGQCLVMMSFSWILTDLFVCFVFPCVLIITLYLRIFYVVHQQVKV----------------INSL 230

  Fly   326 PKPRPSIQVEQSTISTMRR--ERKAARTLGIIMSAFLICWLPFFLWYIVSSLCDSCITPRLLVGI 388
            .|....:     |..:::|  |.|||.|||||:|.:|:||:|::       :|...:....::.:
Zfish   231 MKGGKCV-----TEGSVKRKSESKAALTLGIIVSVYLLCWIPYY-------ICTLTVNSSTVLSV 283

  Fly   389 LFWIGYFNSALNPIIYAYFNRDFRAAFKKTLKSL 422
            |.|:.|.||.|||::||.    |...||||:|.:
Zfish   284 LTWVLYANSGLNPLVYAL----FYPWFKKTVKHI 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta1RNP_001262843.1 7tm_4 112..>231 CDD:304433 40/118 (34%)
7tm_1 124..404 CDD:278431 83/292 (28%)
taar19bXP_021335134.1 7tmA_TAARs 32..310 CDD:320183 90/322 (28%)
TM helix 1 32..58 CDD:320183 6/25 (24%)
TM helix 2 65..91 CDD:320183 13/25 (52%)
TM helix 3 103..133 CDD:320183 10/29 (34%)
TM helix 4 145..168 CDD:320183 4/31 (13%)
TM helix 5 190..219 CDD:320183 8/28 (29%)
TM helix 6 245..275 CDD:320183 15/36 (42%)
TM helix 7 278..303 CDD:320183 10/28 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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