DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta1R and taar18g

DIOPT Version :9

Sequence 1:NP_001262843.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_009303908.2 Gene:taar18g / 100330560 ZFINID:ZDB-GENE-060413-11 Length:349 Species:Danio rerio


Alignment Length:371 Identity:107/371 - (28%)
Similarity:177/371 - (47%) Gaps:59/371 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GSGSSIAVSVEDVVAGQAQDIQASEGSTDDADGSSHLALVFVKCFIIGFI---ILAA--ILGNML 127
            |..|.:|...||         |.::....|.:.|.......::.:||.::   :|:|  :..|:|
Zfish    14 GEDSLMAYETED---------QETQYCFPDINSSCVKEQRSIQEYIIMYVFFSLLSAWTVFLNLL 69

  Fly   128 VIVSVMRHRKLRIITNYFVVSLAVADMLVALCAMTFNASVMISGKWMFGSVMCDMWNSFDVYFST 192
            ||:|:...:||...||..::||||.|:|:.| ||...|..::...|.||.:.|.::.......|:
Zfish    70 VIISISHFKKLHTPTNMIILSLAVNDLLIGL-AMPIEAFRLVDTCWYFGELFCGLFLIVMALLSS 133

  Fly   193 ASIMHLCCISVDRYYAIVQPLDYPLIMTQRRVFIMLLMVWLSPALLSFLPICSGWYTTTENYKYL 257
            ||:.:|..|:||||.|:...|.||..:|...||:.:.:.|........:.:.:..|..|.:.|.:
Zfish   134 ASLSNLVLIAVDRYVAVCHSLLYPQKITMTNVFVSICLCWSFSLTYCTVFVVNNTYLDTSSRKRV 198

  Fly   258 KSNPHICEFKVNKAYAIVSSSMSFWIPGIVMLSMYYRIYQEADRQERLVYRSKVAALLLEKHLQI 322
            .....|..|..  .|.|:....||.:|.:||:::|.||:..|.:|.::                |
Zfish   199 CYGECILHFSF--TYVIIDEIYSFLLPCVVMITVYLRIFCVAIKQVKV----------------I 245

  Fly   323 SQIPKPRPSIQVEQSTISTMRRERKAARTLGIIMSAFLICWLPFFLWYIVSSLCDSCITPRLLVG 387
            :.:.|....  |::.::. .:.|.|||.||||:::.:|:|::|:   |::|           |.|
Zfish   246 NSLMKGGKC--VKEGSVK-RKSEHKAALTLGIVVTVYLLCYIPY---YLIS-----------LTG 293

  Fly   388 I-------LFWIGYFNSALNPIIYAYFNRDFRAAFKK--TLKSLFP 424
            :       |.|..|.||.|||:|||.|.|.|:.:.|.  |||.|.|
Zfish   294 VYSKTITYLLWTLYVNSGLNPLIYALFYRWFKTSVKHILTLKILQP 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta1RNP_001262843.1 7tm_4 112..>231 CDD:304433 43/123 (35%)
7tm_1 124..404 CDD:278431 83/286 (29%)
taar18gXP_009303908.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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