DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta1R and adrb2b

DIOPT Version :9

Sequence 1:NP_001262843.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001082940.2 Gene:adrb2b / 100037315 ZFINID:ZDB-GENE-070410-32 Length:409 Species:Danio rerio


Alignment Length:431 Identity:138/431 - (32%)
Similarity:221/431 - (51%) Gaps:60/431 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 EGLGSAVGSGSSIAVSVEDVVAG--QAQDIQASEGSTDDADGSSHLALVFVKCFIIGFIILAAIL 123
            ||..:.:...:|:.:::.   ||  .:..:..|.....||:       |.:...:||.::|..:.
Zfish     2 EGDNTLITENTSLYMNIS---AGLNASSPVSLSVSEYSDAE-------VVLISILIGILVLVIVF 56

  Fly   124 GNMLVIVSVMRHRKLRIITNYFVVSLAVADMLVALCAMTFNASVMISGKWMFGSVMCDMWNSFDV 188
            ||.|||.:::|.::|:.:||||:.|||.||:::.|..:.|.|..::...|.||:..|:.|.:.||
Zfish    57 GNALVISAIVRFQRLQTVTNYFISSLACADLVMGLMVVPFGACYILLNTWHFGNFFCEFWTATDV 121

  Fly   189 YFSTASIMHLCCISVDRYYAIVQPLDYPLIMTQRRVFIMLLMVWLSPALLSFLPICSGWYTTTE- 252
            ...||||..||.|::|||.||:.||.|..::|:|:...|::.||...||:|||||...|:.:.| 
Zfish   122 LCVTASIETLCVIALDRYIAIMWPLRYQSMLTKRKACGMVIGVWAVAALISFLPIHMEWWVSDEP 186

  Fly   253 NYKYLKSNPHICEFKVNKAYAIVSSSMSFWIPGIVMLSMYYRIYQEADRQERLVYRSKVAALLLE 317
            ........|..|:|..|.|||:.||.:||:||.::|..:|.|::|||.||.:.:.|       :|
Zfish   187 EALSCLEEPTCCDFNTNAAYAVTSSIISFYIPLVIMAFVYSRVFQEARRQLQKIDR-------IE 244

  Fly   318 KHLQISQIPKPRPSIQVEQSTISTMRRERKAARTLGIIMSAFLICWLPFFLWYIVSSL--CDSCI 380
            ..:: :|....:...:::........::.||.:||||||..|.:||||||:..:|:::  .|:.:
Zfish   245 GRIR-TQSLSTQEGNEIKNRRTKFCMKDHKALKTLGIIMGTFTLCWLPFFVLNVVAAIWKMDNIM 308

  Fly   381 TPRLLVGILFWIGYFNSALNPIIYAYFNRDFRAAFKKTLKSLFPYAFYFCRRGRGRDDDRDLEFG 445
            .|   ..||.||||.|||.||:||.. :.:||.||::.|          |.|....         
Zfish   309 LP---FRILNWIGYANSAFNPLIYCR-SPEFRCAFQEIL----------CWRPSHL--------- 350

  Fly   446 GPSRRGTNGAQRTGSGSAEMANCVNSTASSEIHMSVMRARQ 486
             ||.|...|...:|.             |.::|....|.|:
Zfish   351 -PSTRSKKGYLYSGH-------------SWKVHTKTTRPRE 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta1RNP_001262843.1 7tm_4 112..>231 CDD:304433 47/118 (40%)
7tm_1 124..404 CDD:278431 108/282 (38%)
adrb2bNP_001082940.2 7tm_GPCRs 41..339 CDD:333717 115/309 (37%)
TM helix 1 43..67 CDD:320095 8/23 (35%)
TM helix 2 76..98 CDD:320095 10/21 (48%)
TM helix 3 114..136 CDD:320095 10/21 (48%)
TM helix 4 159..175 CDD:320095 7/15 (47%)
TM helix 5 204..227 CDD:320095 10/22 (45%)
TM helix 6 272..297 CDD:320095 15/24 (63%)
TM helix 7 308..333 CDD:320095 14/28 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X822
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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