DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Octbeta1R and taar14j

DIOPT Version :9

Sequence 1:NP_001262843.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001076545.1 Gene:taar14j / 100034516 ZFINID:ZDB-GENE-041014-34 Length:320 Species:Danio rerio


Alignment Length:344 Identity:91/344 - (26%)
Similarity:161/344 - (46%) Gaps:79/344 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 VFVKCFIIGFIILAA-----ILGNMLVIVSVMRHRKLRIITNYFVVSLAVADMLVALCAMTFNAS 166
            |.:..::|.::..||     :.||:|||:||...::|....|..::|||.:|:||.:..|....:
Zfish    12 VSLSVYVILYVAAAAVALLTVCGNLLVIISVSHFKQLHTPANILILSLAASDLLVGVFVMPLLFT 76

  Fly   167 VMISGKWMFGSVMCDMWNSFDVYFSTASIMHLCCISVDRYYAIVQPLDYPLIMTQRRVFIMLLMV 231
            ::|...|:.|.|||.:....:...::.|:..:..|:|||:.|    |.:|...:::         
Zfish    77 LLIESCWIAGPVMCAVLKFVNFQATSVSVHTVSLIAVDRFLA----LSFPFFYSEK--------- 128

  Fly   232 WLSPALLSFLPIC----SGW-YTTTENYKYLKSNPH--------ICEFKVNKAYAIVSSSMSFWI 283
                  :|...||    |.| ::...|:..|..|.|        :|.|.:::..:::...:.|.:
Zfish   129 ------ISLTVICIAALSNWLFSLFYNFTVLYINRHFTGFMCPGVCFFVIDEVSSLIDLLIVFVM 187

  Fly   284 PGIVMLSMYYRIYQEADRQERLVYRSKVAALLLEKHLQISQIPKPRPSIQVEQSTISTMRR---- 344
            |..:::.:|..::                 ::.:||....:      ::||..||.|:..:    
Zfish   188 PCTLIIILYTHVF-----------------VIAKKHATAIR------ALQVHNSTESSKNKISDK 229

  Fly   345 -ERKAARTLGIIMSAFLICWLPFFLWYIVSSLCDSCITPRLL----VGILFWIGYFNSALNPIIY 404
             |||||..|||::..||:|.||    |.::||..|..|..||    |.::|:  :.||.:|||||
Zfish   230 SERKAAMLLGILVFVFLLCLLP----YYITSLVISYTTVDLLHVRDVAVIFF--FVNSTINPIIY 288

  Fly   405 AYFNRDFRAAFKKTLKSLF 423
            |.    |...|:|.||.:|
Zfish   289 AL----FYPWFQKCLKLIF 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta1RNP_001262843.1 7tm_4 112..>231 CDD:304433 33/123 (27%)
7tm_1 124..404 CDD:278431 78/301 (26%)
taar14jNP_001076545.1 7tm_1 34..288 CDD:278431 78/301 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.