DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Octbeta1R and taar13c

DIOPT Version :10

Sequence 1:NP_651057.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001076509.1 Gene:taar13c / 100034378 ZFINID:ZDB-GENE-041014-60 Length:341 Species:Danio rerio


Alignment Length:339 Identity:107/339 - (31%)
Similarity:173/339 - (51%) Gaps:62/339 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 GSSHLALVFVKCFIIGFIILAAILGNMLVIVSVMRHRKLRIITNYFVVSLAVADMLVALCAMTFN 164
            |:.|::...|...|:...:...:|||.:||:|:...::|:..||..|:|||:||:|:.|..|.|:
Zfish    25 GTHHVSTQTVVYLILASAMTVTVLGNSVVIISIAHFKQLQTPTNILVMSLALADLLLGLVVMPFS 89

  Fly   165 ASVMISGKWMFGSVMCDMWNSFDVYFSTASIMHLCCISVDRYYAIVQPLDYPLIMTQRRVFIMLL 229
            ....:.|.|.:|...|.:...||::.::.||.||..|:|||:.|:..||.||..:|....::|::
Zfish    90 MIRSVDGCWYYGETFCLLHTGFDLFLTSVSIFHLIFIAVDRHQAVCFPLQYPTRITIPVAWVMVM 154

  Fly   230 MVWLSPALLSFLPICSGWYTTTENYKYLKSN-----PHI--------CEFKVNKAYAIVSSSMSF 281
            :.|...|..|:            ...|.|:|     .:|        |....|..::::.:.::|
Zfish   155 ISWSMAAFYSY------------GVVYSKANLEGLEEYIASVYCMGGCTLYFNALWSVLDTLLTF 207

  Fly   282 WIPGIVMLSMYYRIYQEADRQERLVYRSKVAALLLEKHLQ-ISQIPKPRPSIQVEQSTI--STMR 343
            ::|..||:.:|.||:                 ::.:||:: |::      :.|.|...:  :..|
Zfish   208 FLPCSVMVGLYARIF-----------------VVAKKHIKSITE------ANQNENENVFKNPRR 249

  Fly   344 RERKAARTLGIIMSAFLICWLPFFLWYIVSSLCDSCI---TPRLLVGILFWIGYFNSALNPIIYA 405
            .|||||:||||::.||::||||||    ::||.|..|   ||..|.....|:||.||.||||||.
Zfish   250 SERKAAKTLGIVVGAFILCWLPFF----INSLVDPYINFSTPYALFDAFGWLGYTNSTLNPIIYG 310

  Fly   406 YFNRDFRAAFKKTL 419
            .|...||    |||
Zfish   311 LFYPWFR----KTL 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta1RNP_651057.1 7tmA_DmOct-betaAR-like 109..415 CDD:320194 102/324 (31%)
TM helix 1 109..135 CDD:320194 8/25 (32%)
TM helix 2 142..168 CDD:320194 12/25 (48%)
TM helix 3 180..210 CDD:320194 12/29 (41%)
TM helix 4 222..245 CDD:320194 4/22 (18%)
TM helix 5 269..298 CDD:320194 8/28 (29%)
TM helix 6 343..373 CDD:320194 18/29 (62%)
TM helix 7 383..408 CDD:320194 12/24 (50%)
taar13cNP_001076509.1 7tmA_TAARs 33..320 CDD:320183 103/329 (31%)
TM helix 1 34..60 CDD:320183 8/25 (32%)
TM helix 2 67..93 CDD:320183 12/25 (48%)
TM helix 3 105..135 CDD:320183 12/29 (41%)
TM helix 4 147..170 CDD:320183 4/34 (12%)
TM helix 5 195..224 CDD:320183 8/45 (18%)
TM helix 6 249..279 CDD:320183 20/33 (61%)
TM helix 7 288..313 CDD:320183 12/24 (50%)

Return to query results.
Submit another query.