DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Octbeta1R and taar20o

DIOPT Version :9

Sequence 1:NP_001262843.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_017213636.2 Gene:taar20o / 100002324 ZFINID:ZDB-GENE-060414-4 Length:350 Species:Danio rerio


Alignment Length:361 Identity:101/361 - (27%)
Similarity:176/361 - (48%) Gaps:45/361 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GSGSSIAVSVEDVVAGQAQDIQASEGSTDDADGS----SHLALVFVKCFIIGFIILA-AILGNML 127
            |..|......:.::|.:.:| |.::....|.:.|    .|....::..::...::.| .:..|:|
Zfish     6 GEQSKPLTDGDSLMAYETED-QETQYCFPDINSSCVKEKHSRYGYITTYLFVSLLSAWTVFLNLL 69

  Fly   128 VIVSVMRHRKLRIITNYFVVSLAVADMLVALCAMTFNASVMISGKWMFGSVMCDMWNSFDVYFST 192
            ||:|:...:||...||..::||||.|:||.| .|...|..:|...|.||...|.::..|.....:
Zfish    70 VIISISHFKKLHTPTNMIILSLAVTDLLVGL-VMPVEAIRLIETCWYFGDTFCGLYIFFVSLLLS 133

  Fly   193 ASIMHLCCISVDRYYAIVQPLDYPLIMTQRRVFIMLLMVWLS-PALLSFLPICSGWYTTTENYKY 256
            ||:.:|..|:||||.|:..||.||..:|..:..:.:.:.|.. .|.:..|.|.:.::.|:.....
Zfish   134 ASLGNLVLIAVDRYVAVCHPLLYPQKITITKTLMSICLSWAGLTAYIITLVINNSYFDTSHRTDV 198

  Fly   257 LKSNPHICEFKVNKAYAIVSSSMSFWIPGIVMLSMYYRIYQEADRQERLVYRSKVAALLLEKHLQ 321
            ....   |.:.::.::.:....|||..|.|:::::|.||:....:|.::                
Zfish   199 CYGQ---CLYMISYSWILTELFMSFIFPCILIITLYLRIFYVVHQQVKV---------------- 244

  Fly   322 ISQIPKPRPSIQVEQSTISTMRR--ERKAARTLGIIMSAFLICWLPFFLWYIVSSLCDSCITPRL 384
            |:.:.|....:     |..:::|  |.|||.|||||:|.:|:||:|:|::    ||..:..|  .
Zfish   245 INSLMKGGKCV-----TEGSVKRKSESKAALTLGIIVSVYLLCWIPYFIY----SLTVNAST--T 298

  Fly   385 LVGILFWIGYFNSALNPIIYAYFNRDFRAAFKKTLK 420
            :.|:||.: :.||.|||::||.    |...||||.|
Zfish   299 INGLLFAV-FANSGLNPLVYAL----FYPWFKKTAK 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta1RNP_001262843.1 7tm_4 112..>231 CDD:304433 40/119 (34%)
7tm_1 124..404 CDD:278431 84/282 (30%)
taar20oXP_017213636.2 7tmA_TAARs 50..327 CDD:320183 90/312 (29%)
TM helix 1 51..77 CDD:320183 6/25 (24%)
TM helix 2 84..109 CDD:320183 12/25 (48%)
TM helix 3 121..151 CDD:320183 11/29 (38%)
TM helix 4 163..186 CDD:320183 3/22 (14%)
TM helix 5 208..237 CDD:320183 8/28 (29%)
TM helix 6 263..293 CDD:320183 17/33 (52%)
TM helix 7 296..321 CDD:320183 11/31 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.