DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta1R and taar20b

DIOPT Version :10

Sequence 1:NP_651057.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_017213576.3 Gene:taar20b / 100001562 ZFINID:ZDB-GENE-060414-1 Length:352 Species:Danio rerio


Alignment Length:366 Identity:99/366 - (27%)
Similarity:163/366 - (44%) Gaps:61/366 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GSGSSIAVSVEDVVAGQAQ----DIQAS---EGSTDDADGSSHLALVFVKCFIIGFIILAAILGN 125
            |..|.:|...||   .:.|    ||.:|   |..:.|.....:|.:..:..:.: |:       |
Zfish    14 GGDSLMAYETED---QETQYCFPDINSSCLKENRSSDEYNIIYLLVSLLSAWTV-FL-------N 67

  Fly   126 MLVIVSVMRHRKLRIITNYFVVSLAVADMLVALCAMTFNASVMISGKWMFGSVMCDMWNSFDVYF 190
            :|||:|:...:||...||..::||||.|:|:.| .|...|..:|...|.||...|.::..|....
Zfish    68 LLVIISISHFKKLHTPTNMIILSLAVNDLLIGL-VMPIEAFRLIETCWYFGDTFCGLYLFFVTLL 131

  Fly   191 STASIMHLCCISVDRYYAIVQPLDYPLIMTQRRVF---IMLLMVWLSPALLSFLPICSGWYTTTE 252
            .:||:..|..|:||||.|:..||.|...:|..:.|   |.|..|..|..|...:.|.:..:.|:.
Zfish   132 LSASLGSLVLIAVDRYVAVCHPLLYTQKITMTKTFCLSICLSWVCFSAYLTGLININNQDFDTSH 196

  Fly   253 NYKYLKSNPHICEFKVNKAYAIVSSSMSFWIPGIVMLSMYYRIYQEADRQERLVYRSKVAALLLE 317
            ........   |...:..::.:....:||..|..::.::|.||:....:|.::            
Zfish   197 RTDVCYGQ---CIIMITFSWILTDLFVSFIFPCTLIFTLYLRIFYVVHQQVKV------------ 246

  Fly   318 KHLQISQIPKPRPSI---QVEQSTISTMRRERKAARTLGIIMSAFLICWLPFFLWYIVSSLCDSC 379
                |:.:.|....:   .||:      :.|.|||.|||||:..:|:|::|::       :|...
Zfish   247 ----INSLMKGGKCVTEGSVER------KSESKAALTLGIIVLVYLLCYIPYY-------ICSLT 294

  Fly   380 ITPRLLVGILFWIGYFNSALNPIIYAYFNRDFRAAFKKTLK 420
            :.....:.:|.||.|.||.:||::||.    |...||||:|
Zfish   295 VNSSTALNVLIWIVYSNSGMNPLVYAL----FYPWFKKTVK 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta1RNP_651057.1 7tmA_DmOct-betaAR-like 109..415 CDD:320194 82/311 (26%)
TM helix 1 109..135 CDD:320194 6/25 (24%)
TM helix 2 142..168 CDD:320194 11/25 (44%)
TM helix 3 180..210 CDD:320194 11/29 (38%)
TM helix 4 222..245 CDD:320194 7/25 (28%)
TM helix 5 269..298 CDD:320194 6/28 (21%)
TM helix 6 343..373 CDD:320194 12/29 (41%)
TM helix 7 383..408 CDD:320194 10/24 (42%)
taar20bXP_017213576.3 None

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