DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta1R and htr2cl1

DIOPT Version :10

Sequence 1:NP_651057.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_073762008.1 Gene:htr2cl1 / 100000981 ZFINID:ZDB-GENE-081104-48 Length:531 Species:Danio rerio


Alignment Length:377 Identity:110/377 - (29%)
Similarity:176/377 - (46%) Gaps:84/377 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 IIGFIILAAILGNMLVIVSVMRHRKLRIITNYFVVSLAVADMLVALCAMTFN-ASVMISGKWMFG 176
            :|..||:..|.||:|||::|...:||:..||:|:.|||||||||.:..|..: .:::....|...
Zfish    74 LILVIIILTIGGNILVILAVSLEKKLQNATNFFLRSLAVADMLVGILVMPISLINILYDYAWPLP 138

  Fly   177 SVMCDMWNSFDVYFSTASIMHLCCISVDRYYAIVQPLDYPLIMTQRRVFIMLLMVW--------- 232
            |.:|.:|...||.||||||||||.||:|||.||..|:::....::.:..:.:..||         
Zfish   139 SALCPIWIYLDVLFSTASIMHLCAISLDRYVAIRNPIEHSRFNSRTKAMLKIAAVWTISIGQRNT 203

  Fly   233 ----LSPALLSF-LPICSGWYTTTENYKYLKSNPHICEFKVNKAYAIVSSSMSFWIPGIVMLSMY 292
                ||...:|. :|:..    .:...|.||:.  ||... .:.:.:|.|.::|:||.::|:..|
Zfish   204 DLMILSKTGISMPIPVIG----LSNREKVLKNG--ICALN-EELFILVGSFVAFFIPLVIMVVTY 261

  Fly   293 YRIYQEADRQERL-VYRSKVAALLLEKHLQ-----ISQ-IPKPRPS------------------- 331
            ....|...||..: :|..|.::   ::.||     .|| :|...||                   
Zfish   262 CLTVQALQRQATVFLYEGKASS---QQPLQPPAPPSSQLVPPLAPSRRSSLNCLRISNSDGNTLG 323

  Fly   332 IQVEQSTIS------------------------------TMRRERKAARTLGIIMSAFLICWLPF 366
            :.|...|||                              .::.||:|::.||::...||..|.||
Zfish   324 LTVPPDTISIIPSSEAPSQMNSPAGRDPAGAHGRRGMMQAIKNERRASKVLGVVFFLFLFMWCPF 388

  Fly   367 FLWYIVSSLCDSCITPRL---LVGILFWIGYFNSALNPIIYAYFNRDFRAAF 415
            |:..::..||.......|   |:.:..|:||.:|.:||::|..||:.:|.||
Zfish   389 FITNVLYVLCHRTCKETLLTELLNVFVWVGYISSGVNPLVYTLFNKTYRRAF 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta1RNP_651057.1 7tmA_DmOct-betaAR-like 109..415 CDD:320194 108/375 (29%)
TM helix 1 109..135 CDD:320194 10/21 (48%)
TM helix 2 142..168 CDD:320194 13/26 (50%)
TM helix 3 180..210 CDD:320194 20/29 (69%)
TM helix 4 222..245 CDD:320194 6/36 (17%)
TM helix 5 269..298 CDD:320194 7/28 (25%)
TM helix 6 343..373 CDD:320194 11/29 (38%)
TM helix 7 383..408 CDD:320194 9/27 (33%)
htr2cl1XP_073762008.1 None

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