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Protein Alignment tHMG2 and HMGB3
DIOPT Version :9
Sequence 1: | NP_001163689.1 |
Gene: | tHMG2 / 42651 |
FlyBaseID: | FBgn0038979 |
Length: | 134 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001031075.1 |
Gene: | HMGB3 / 838659 |
AraportID: | AT1G20696 |
Length: | 147 |
Species: | Arabidopsis thaliana |
Alignment Length: | 108 |
Identity: | 31/108 - (28%) |
Similarity: | 53/108 - (49%) |
Gaps: | 17/108 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 RPKKPMSAFMLWMNSTGRKNIRAEHP-DFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAEYK 71
:||:|.|||.::|... |...:.||| :.||..|...|||.|::::|..|..:...|.|...||:
plant 34 KPKRPSSAFFVFMEDF-RVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYE 97
Fly 72 EKLEKWN-----AFKEHQTESFPHIYEAPLSSRFSKTNQRPTL 109
:.::.:| |.::.:. |:|:|.:...|..|
plant 98 KNMKAYNKKLVIALRKMRN----------LTSQFQRLTMRMML 130
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
1 |
1.000 |
57 |
1.000 |
Domainoid score |
I3986 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1641977at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.820 |
|
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