Protein Alignment tHMG2 and HMGB2

DIOPT Version :10

• Sequence 1: NP_001163689.1
• Gene: tHMG2 / 42651
• FlyBaseID: FBgn0038979
• Length: 134
• Species: Drosophila melanogaster
• Sequence 2: NP_564123.1
• Gene: HMGB2 / 838658
• AraportID: AT1G20693
• Length: 144
• Species: Arabidopsis thaliana
• Alignment Length: 72
• Identity: 22/72 - (30%)
• Similarity: 41/72 - (56%)
• Gaps: 2/72 - (2%)

  Fly     8 RPKKPMSAFMLWMNSTGRKNIRAEHP-DFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAEYK 71
            :||:|.|||.::|... |:..:.|:| :.||..|....|:.|::::|..|..:...|.|...||:
plant    37 KPKRPASAFFVFMEDF-RETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYE 100

  Fly    72 EKLEKWN 78
            :.::.:|
plant   101 KNIKAYN 107

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG2	NP_001163689.1	HMG-box_SSRP1-like	11..78	CDD:438810	19/67 (28%)
HMGB2	NP_564123.1	HMG-box_AtHMGB1-like	39..99	CDD:438821	18/60 (30%)