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Protein Alignment tHMG2 and Hmgb4

DIOPT Version :10

Sequence 1:	NP_001163689.1	Gene:	tHMG2 / 42651	FlyBaseID:	FBgn0038979	Length:	134	Species:	Drosophila melanogaster
Sequence 2:	NP_081312.2	Gene:	Hmgb4 / 69317	MGIID:	1916567	Length:	181	Species:	Mus musculus

Alignment Length:	90	Identity:	25/90 - (27%)
Similarity:	47/90 - (52%)	Gaps:	17/90 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MMSDYGAR----------PKKPMSAFMLWMNSTGRKN---IRAEHPDFSVQEVSVKGGEMWRAMA 52
            ||:..|.|          |:||.|:|:|:    .|.:   ::.|:||::|.:|:...|:||....
Mouse    75 MMNYIGKRRKRRKRDPKAPRKPPSSFLLF----SRDHYAMLKQENPDWTVVQVAKAAGKMWSTTD 135

  Fly    53 DEHKIVWQESASKAMAEYKEKLEKW 77
            :..|..:::.|:...|:|.|:.|.:
Mouse   136 EAEKKPYEQKAALMRAKYFEEQEAY 160

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.