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Protein Alignment tHMG2 and Hmgb4

DIOPT Version :10

Sequence 1:	NP_001163689.1	Gene:	tHMG2 / 42651	FlyBaseID:	FBgn0038979	Length:	134	Species:	Drosophila melanogaster
Sequence 2:	NP_001102933.1	Gene:	Hmgb4 / 685271	RGDID:	1596426	Length:	181	Species:	Rattus norvegicus

Alignment Length:	87	Identity:	24/87 - (27%)
Similarity:	47/87 - (54%)	Gaps:	11/87 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MMSDYGAR----------PKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEH 55
            ||:..|.|          |:||.|:|:|:......| ::.|:|:::|.:|:...|:||..:.|..
  Rat    75 MMNYVGKRRKRRKRDPLAPRKPPSSFLLFSLDHFAK-LKQENPNWTVVQVAKAAGKMWSMITDVD 138

  Fly    56 KIVWQESASKAMAEYKEKLEKW 77
            |..:::.|:...|:|.::.|.:
  Rat   139 KRPYEQKAAIMRAKYFQEREAY 160

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.