DRSC/TRiP Functional Genomics Resources

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Protein Alignment tHMG2 and tox4a

DIOPT Version :10

Sequence 1:NP_001163689.1 Gene:tHMG2 / 42651 FlyBaseID:FBgn0038979 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_001428573.1 Gene:tox4a / 559853 ZFINID:ZDB-GENE-070912-576 Length:685 Species:Danio rerio


Alignment Length:79 Identity:22/79 - (27%)
Similarity:43/79 - (54%) Gaps:1/79 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAEYKEK 73
            |:||:||:.|:...| :..|:.::|:.:..|||.....||.::.:|.|.|::.....|..:|.:.
Zfish   300 PQKPVSAYALFFRDT-QAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKDYLKA 363

  Fly    74 LEKWNAFKEHQTES 87
            |..:.|.:..::.|
Zfish   364 LAAYRASQLSKSSS 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tHMG2NP_001163689.1 HMG-box_SSRP1-like 11..78 CDD:438810 19/66 (29%)
tox4aNP_001428573.1 None

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