Protein Alignment tHMG2 and hmg20b

DIOPT Version :9

• Sequence 1: NP_001163689.1
• Gene: tHMG2 / 42651
• FlyBaseID: FBgn0038979
• Length: 134
• Species: Drosophila melanogaster
• Sequence 2: NP_001018387.1
• Gene: hmg20b / 553572
• ZFINID: ZDB-GENE-030131-4258
• Length: 301
• Species: Danio rerio
• Alignment Length: 76
• Identity: 20/76 - (26%)
• Similarity: 41/76 - (53%)
• Gaps: 1/76 - (1%)

  Fly     9 PKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAEYKEK 73
            ||.|::.::.::|.. |::|||.|||....|::.:.|..|..:|...|..:.:.|.:...:|..:
Zfish    53 PKAPVTGYVRFLNER-REHIRALHPDLPFPEITKRLGAEWSRLAPHDKQRYLDEAERDKMQYARE 116

  Fly    74 LEKWNAFKEHQ 84
            |.::...:.:|
Zfish   117 LREYQKSEAYQ 127

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG2	NP_001163689.1	HMGB-UBF_HMG-box	9..75	CDD:238686	18/65 (28%)
hmg20b	NP_001018387.1	HMGB-UBF_HMG-box	53..118	CDD:238686	18/65 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810