Protein Alignment tHMG2 and RGD1561694

DIOPT Version :9

• Sequence 1: NP_001163689.1
• Gene: tHMG2 / 42651
• FlyBaseID: FBgn0038979
• Length: 134
• Species: Drosophila melanogaster
• Sequence 2: XP_038948739.1
• Gene: RGD1561694 / 498388
• RGDID: 1561694
• Length: 209
• Species: Rattus norvegicus
• Alignment Length: 71
• Identity: 24/71 - (33%)
• Similarity: 42/71 - (59%)
• Gaps: 1/71 - (1%)

  Fly     9 PKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAEYKEK 73
            ||:|.|||.|:. |..|..|::|||..|:.:.:.|.||||...:.:.|..:::.|:|...:|::.
  Rat    95 PKRPPSAFFLFC-SEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKD 158

  Fly    74 LEKWNA 79
            :..:.|
  Rat   159 IAAYRA 164

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG2	NP_001163689.1	HMGB-UBF_HMG-box	9..75	CDD:238686	23/65 (35%)
RGD1561694	XP_038948739.1	HMG_box_2	6..78	CDD:401091
		HMG_box	95..162	CDD:395407	23/67 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910