DRSC/TRiP Functional Genomics Resources

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Protein Alignment tHMG2 and Tox

DIOPT Version :10

Sequence 1:NP_001163689.1 Gene:tHMG2 / 42651 FlyBaseID:FBgn0038979 Length:134 Species:Drosophila melanogaster
Sequence 2:XP_063143968.1 Gene:Tox / 362481 RGDID:1310455 Length:527 Species:Rattus norvegicus


Alignment Length:126 Identity:32/126 - (25%)
Similarity:58/126 - (46%) Gaps:25/126 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SDYGARPK--------------KPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMAD 53
            ||.|.:||              ||:||:.|:...| :..|:.::|:.:..|||.....||..:.:
  Rat   243 SDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDT-QAAIKGQNPNATFGEVSKIVASMWDGLGE 306

  Fly    54 EHKIVWQESASKAMAEYKEKLEKWNAFKEHQTESFPHIYEAPLSSRFSK----TNQRPTLF 110
            |.|.|:::....|..||.::|..:.|....::      |..|:..:.|:    .|.:|::|
  Rat   307 EQKQVYKKKTEAAKKEYLKQLAAYRASLVSKS------YNDPVDVKTSQPPQLVNSKPSVF 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tHMG2NP_001163689.1 HMG-box_SSRP1-like 11..78 CDD:438810 20/66 (30%)
ToxXP_063143968.1 None

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