DRSC/TRiP Functional Genomics Resources

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Protein Alignment tHMG2 and Sox15

DIOPT Version :10

Sequence 1:NP_001163689.1 Gene:tHMG2 / 42651 FlyBaseID:FBgn0038979 Length:134 Species:Drosophila melanogaster
Sequence 2:XP_061509362.1 Gene:Sox15 / 3291495 VectorBaseID:AGAMI1_010058 Length:901 Species:Anopheles gambiae


Alignment Length:101 Identity:27/101 - (26%)
Similarity:45/101 - (44%) Gaps:15/101 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ARPKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAEYK 71
            ||.::||:|||:|. ...||.:..|:||....::|...|:.||::..:.:           ..|.
Mosquito   195 ARIRRPMNAFMVWA-KVERKKLADENPDLHNADLSKMLGKKWRSLTPQDR-----------RPYV 247

  Fly    72 EKLEKWNAFKEHQTESFPHIYEAPLSSRFSKTNQRP 107
            |:.|:....  |.|| .|:....|...:.:|....|
Mosquito   248 EEAERLRVI--HMTE-HPNYKYRPRRRKHAKARAGP 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tHMG2NP_001163689.1 HMG-box_SSRP1-like 11..78 CDD:438810 18/66 (27%)
Sox15XP_061509362.1 None

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