Protein Alignment tHMG2 and Hmgb2

DIOPT Version :9

• Sequence 1: NP_001163689.1
• Gene: tHMG2 / 42651
• FlyBaseID: FBgn0038979
• Length: 134
• Species: Drosophila melanogaster
• Sequence 2: NP_058883.1
• Gene: Hmgb2 / 29395
• RGDID: 69291
• Length: 210
• Species: Rattus norvegicus
• Alignment Length: 71
• Identity: 24/71 - (33%)
• Similarity: 42/71 - (59%)
• Gaps: 1/71 - (1%)

  Fly     9 PKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAEYKEK 73
            ||:|.|||.|:. |..|..|::|||..|:.:.:.|.||||...:.:.|..:::.|:|...:|::.
  Rat    95 PKRPPSAFFLFC-SEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKD 158

  Fly    74 LEKWNA 79
            :..:.|
  Rat   159 IAAYRA 164

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG2	NP_001163689.1	HMGB-UBF_HMG-box	9..75	CDD:238686	23/65 (35%)
Hmgb2	NP_058883.1	HMG_box_2	6..78	CDD:401091
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	51..102		4/6 (67%)
		HMG_box	95..162	CDD:395407	23/67 (34%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	162..210		1/3 (33%)
		Required for chemotactic activity. /evidence=ECO:0000250|UniProtKB:P26583	165..180		24/71 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820