Protein Alignment tHMG2 and Hmgb1

DIOPT Version :9

• Sequence 1: NP_001163689.1
• Gene: tHMG2 / 42651
• FlyBaseID: FBgn0038979
• Length: 134
• Species: Drosophila melanogaster
• Sequence 2: XP_038945039.1
• Gene: Hmgb1 / 25459
• RGDID: 2802
• Length: 486
• Species: Rattus norvegicus
• Alignment Length: 71
• Identity: 26/71 - (36%)
• Similarity: 42/71 - (59%)
• Gaps: 1/71 - (1%)

  Fly     9 PKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAEYKEK 73
            ||:|.|||.|:. |..|..|:.|||..|:.:|:.|.||||...|.:.|..:::.|:|...:|::.
  Rat   366 PKRPPSAFFLFC-SEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKD 429

  Fly    74 LEKWNA 79
            :..:.|
  Rat   430 IAAYRA 435

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG2	NP_001163689.1	HMGB-UBF_HMG-box	9..75	CDD:238686	25/65 (38%)
Hmgb1	XP_038945039.1	HMG_box_2	277..349	CDD:401091
		HMG_box	366..433	CDD:395407	25/67 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920