Protein Alignment tHMG2 and cmb1

DIOPT Version :10

• Sequence 1: NP_001163689.1
• Gene: tHMG2 / 42651
• FlyBaseID: FBgn0038979
• Length: 134
• Species: Drosophila melanogaster
• Sequence 2: NP_593693.2
• Gene: cmb1 / 2543595
• PomBaseID: SPAC4G9.11C
• Length: 199
• Species: Schizosaccharomyces pombe
• Alignment Length: 78
• Identity: 21/78 - (26%)
• Similarity: 38/78 - (48%)
• Gaps: 6/78 - (7%)

  Fly     9 PKKPMSAFMLWM-----NSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMA 68
            ||||.|||:|:.     |...|:.:.......::.|.:....:.|:.:|::.|..:.:. |||:.
pombe   123 PKKPSSAFILFYKELRNNPKLRQELGIPEAISTLVEETQNASKAWKELAEDKKKPFIDK-SKALK 186

  Fly    69 EYKEKLEKWNAFK 81
            |..:|..|...|:
pombe   187 EQYDKFMKEAGFR 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG2	NP_001163689.1	HMG-box_SSRP1-like	11..78	CDD:438810	18/71 (25%)
cmb1	NP_593693.2	NHP6B	1..196	CDD:227935	20/73 (27%)