Protein Alignment tHMG2 and nhp6

DIOPT Version :9

• Sequence 1: NP_001163689.1
• Gene: tHMG2 / 42651
• FlyBaseID: FBgn0038979
• Length: 134
• Species: Drosophila melanogaster
• Sequence 2: NP_593314.1
• Gene: nhp6 / 2542878
• PomBaseID: SPAC57A10.09c
• Length: 108
• Species: Schizosaccharomyces pombe
• Alignment Length: 78
• Identity: 20/78 - (25%)
• Similarity: 42/78 - (53%)
• Gaps: 7/78 - (8%)

  Fly     9 PKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAEYKEK 73
            ||:.||||| :.:...|:.::.::||.:..::....|:.|:.:....:..::|.|    .:.||:
pombe    16 PKRNMSAFM-FFSIENREKMKTDNPDATFGQLGSLLGKRWKELTSTEREPYEEKA----RQDKER 75

  Fly    74 LEKWNAFKEHQTE 86
            .|:..  ||:.|:
pombe    76 YERER--KEYDTK 86

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG2	NP_001163689.1	HMGB-UBF_HMG-box	9..75	CDD:238686	16/65 (25%)
nhp6	NP_593314.1	NHP6B	<7..>108	CDD:227935	20/78 (26%)
		HMGB-UBF_HMG-box	16..81	CDD:238686	17/71 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	55	1.000	Inparanoid score	I2031
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.860