Protein Alignment tHMG2 and hmg-20

DIOPT Version :10

• Sequence 1: NP_001163689.1
• Gene: tHMG2 / 42651
• FlyBaseID: FBgn0038979
• Length: 134
• Species: Drosophila melanogaster
• Sequence 2: NP_493178.1
• Gene: hmg-20 / 173124
• WormBaseID: WBGene00012209
• Length: 386
• Species: Caenorhabditis elegans
• Alignment Length: 145
• Identity: 30/145 - (20%)
• Similarity: 60/145 - (41%)
• Gaps: 24/145 - (16%)

  Fly     5 YGARPKKPMSAFMLWMNSTGRKNIRAEHPDF-------------SVQEVSVKGGEMWRAMADEHK 56
            |..:|:|...| :.:::....|..|:.:..|             |.:|:::.....|:.:..|.:
 Worm   108 YKKKPEKEKEA-VPFIDPNAPKRNRSGYVHFIIHRRASYSKAVMSQREINISLAADWQKLTAEER 171

  Fly    57 IVWQESASKAMAEYKEKLE---KWNAFKEHQTESFPHIYEAPLSSRFSKTNQRPTLFVYDSKDEA 118
            |.:|:.|.:...:|.|.:|   |.::.||.|.:....:......|:.:|..::.     ||.|:
 Worm   172 IPFQQRADEEKVKYLELMEEYKKTDSHKEFQKKRAKFLSSQSNGSKNAKKRRQA-----DSDDD- 230

  Fly   119 MAPICRTCFSKAKCF 133
             .|..:..|.|...|
 Worm   231 -TPNVQIPFPKPSVF 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG2	NP_001163689.1	HMG-box_SSRP1-like	11..78	CDD:438810	16/82 (20%)
hmg-20	NP_493178.1	HMG-box_SF	126..204	CDD:469606	17/77 (22%)