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Protein Alignment tHMG2 and Hmg20b

DIOPT Version :10

Sequence 1:	NP_001163689.1	Gene:	tHMG2 / 42651	FlyBaseID:	FBgn0038979	Length:	134	Species:	Drosophila melanogaster
Sequence 2:	NP_001415470.1	Gene:	Hmg20b / 15353	MGIID:	1341190	Length:	415	Species:	Mus musculus

Alignment Length:	80	Identity:	22/80 - (27%)
Similarity:	42/80 - (52%)	Gaps:	6/80 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 PKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAEYKEK 73
            ||.|::.::.::|.. |:.||..|||....|::...|..|..:....|..:.:.|.|...:|.::
Mouse    70 PKAPVTGYVRFLNER-REQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEKEKQQYLKE 133

  Fly    74 LEKWNAFKEHQTESF 88
            |  | |::  |:|::
Mouse   134 L--W-AYQ--QSEAY 143

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.