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Protein Alignment tHMG2 and Hmgb1

DIOPT Version :9

Sequence 1:	NP_001163689.1	Gene:	tHMG2 / 42651	FlyBaseID:	FBgn0038979	Length:	134	Species:	Drosophila melanogaster
Sequence 2:	NP_001300823.1	Gene:	Hmgb1 / 15289	MGIID:	96113	Length:	215	Species:	Mus musculus

Alignment Length:	71	Identity:	26/71 - (36%)
Similarity:	42/71 - (59%)	Gaps:	1/71 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 PKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAEYKEK 73
            ||:|.|||.|:. |..|..|:.|||..|:.:|:.|.||||...|.:.|..:::.|:|...:|::.
Mouse    95 PKRPPSAFFLFC-SEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKD 158

  Fly    74 LEKWNA 79
            :..:.|
Mouse   159 IAAYRA 164

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.