Protein Alignment tHMG2 and HMG20A

DIOPT Version :10

• Sequence 1: NP_001163689.1
• Gene: tHMG2 / 42651
• FlyBaseID: FBgn0038979
• Length: 134
• Species: Drosophila melanogaster
• Sequence 2: NP_060670.1
• Gene: HMG20A / 10363
• HGNCID: 5001
• Length: 347
• Species: Homo sapiens
• Alignment Length: 80
• Identity: 20/80 - (25%)
• Similarity: 42/80 - (52%)
• Gaps: 6/80 - (7%)

  Fly     9 PKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAEYKEK 73
            ||.|::.::.:||.. |:.:||:.|:....|::...|..|..:..|.|..:.:.|.:....|.::
Human   103 PKSPLTGYVRFMNER-REQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKE 166

  Fly    74 LEKWNAFKEHQTESF 88
            ||::     .:||::
Human   167 LEQY-----QKTEAY 176

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG2	NP_001163689.1	HMG-box_SSRP1-like	11..78	CDD:438810	16/66 (24%)
HMG20A	NP_060670.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..113		3/9 (33%)
		DUF5401	<59..313	CDD:375164	20/80 (25%)
		HMG-box_HMG20A	83..186	CDD:438833	20/80 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	179..211