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Protein Alignment tHMG1 and Tfam
DIOPT Version :9
Sequence 1: | NP_651055.1 |
Gene: | tHMG1 / 42650 |
FlyBaseID: | FBgn0038978 |
Length: | 126 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_112616.2 |
Gene: | Tfam / 83474 |
RGDID: | 620682 |
Length: | 244 |
Species: | Rattus norvegicus |
Alignment Length: | 79 |
Identity: | 27/79 - (34%) |
Similarity: | 42/79 - (53%) |
Gaps: | 8/79 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 SDCGARPKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATT-- 64
|..|..||||||:::.:......| .||:|||..|.|:..|...|||.:.:.:|.|::.....
Rat 43 SSLGNYPKKPMSSYLRFSTEQLPK-FKAKHPDAKVSELIRKIAAMWRELPEAEKKVYEADFKAEW 106
Fly 65 -----AMAEYKEKL 73
|:::|||:|
Rat 107 KVYKEAVSKYKEQL 120
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1641977at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.820 |
|
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